Conservation of cofitness between PP_5031 and PP_5337 in Pseudomonas putida KT2440

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5031 proline (histidine) APC transporter 1.0 PP_5337 LysR family transcriptional regulator 0.13 16
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS01810 amino acid permease 0.91 PFLU_RS29810 LysR family transcriptional regulator 0.13 75
Pseudomonas fluorescens SBW25 0.88 PFLU_RS01810 amino acid permease 0.91 PFLU_RS29810 LysR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.87 PS417_01755 proline-specific permease 0.91 PS417_28125 LysR family transcriptional regulator — —
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1580 Histidine transport protein (permease) 0.90 Pf1N1B4_2026 Transcriptional regulator low > 87
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_4834 histidine:proton symporter, AAT family 0.90 Psyr_5050 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_4834 histidine:proton symporter, AAT family 0.90 Psyr_5050 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_318 Histidine transport protein (permease) 0.90 PfGW456L13_743 Transcriptional regulator low > 87
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_12275 histidine permease (from data) 0.90 AO353_09945 LysR family transcriptional regulator low > 101
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS14635 proline-specific permease 0.35 RR42_RS29580 LysR family transcriptional regulator low > 128
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS09765 amino acid permease 0.33 ABZR87_RS07510 LysR family transcriptional regulator low > 80
Klebsiella michiganensis M5al 0.64 BWI76_RS08745 proline-specific permease 0.28 BWI76_RS17610 LysR family transcriptional regulator low > 92
Dickeya dianthicola ME23 0.63 DZA65_RS05835 proline-specific permease ProY 0.31 DZA65_RS07765 hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Dickeya dianthicola 67-19 0.62 HGI48_RS05510 proline-specific permease ProY 0.31 HGI48_RS07255 hypochlorite stress DNA-binding transcriptional regulator HypT low > 71
Rahnella sp. WP5 0.62 EX31_RS22070 proline-specific permease ProY 0.28 EX31_RS05520 LysR family transcriptional regulator low > 89
Pectobacterium carotovorum WPP14 0.60 HER17_RS16015 proline-specific permease ProY 0.29 HER17_RS14225 hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Dickeya dadantii 3937 0.59 DDA3937_RS05450 proline-specific permease ProY 0.30 DDA3937_RS07390 hypochlorite stress DNA-binding transcriptional regulator HypT low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF4300 Proline-specific permease proY 0.30 GFF984 LysR family transcriptional regulator QseA low > 78
Escherichia coli ECOR38 0.57 HEPCGN_07170 proY proline-specific permease ProY 0.31 HEPCGN_09540 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 87
Escherichia coli BW25113 0.57 b0402 proY predicted cryptic proline transporter (NCBI) 0.31 b4327 yjiE predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli BL21 0.57 ECD_00350 proline-specific permease 0.31 ECD_04196 hypochlorite-responsive transcription factor low > 61
Escherichia coli ECOR27 0.57 NOLOHH_01460 proY proline-specific permease ProY 0.31 NOLOHH_03860 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Escherichia fergusonii Becca 0.57 EFB2_03655 Proline-specific permease ProY 0.31 EFB2_04117 HTH-type transcriptional regulator YjiE low > 86
Escherichia coli Nissle 1917 0.57 ECOLIN_RS02425 proline-specific permease ProY 0.31 ECOLIN_RS24870 hypochlorite stress DNA-binding transcriptional regulator HypT low > 55
Escherichia coli ECRC62 0.57 BNILDI_22875 proY proline-specific permease ProY 0.31 BNILDI_07735 hypT hypochlorite stress DNA-binding transcriptional regulator HypT low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_03274 Proline-specific permease ProY 0.31 OHPLBJKB_03739 HTH-type transcriptional regulator YjiE low > 73

Not shown: 11 genomes with orthologs for PP_5031 only; 27 genomes with orthologs for PP_5337 only