Conservation of cofitness between PP_2078 and PP_5203 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2078 transcriptional activator protein LysR 1.0 PP_5203 5-formyltetrahydrofolate cyclo-ligase 0.18 11
Escherichia coli Nissle 1917 0.52 ECOLIN_RS15935 DNA-binding transcriptional regulator LysR 0.34 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase low > 52
Escherichia fergusonii Becca 0.52 EFB2_01044 Octopine catabolism/uptake operon regulatory protein OccR 0.35 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase low > 86
Escherichia coli ECOR38 0.52 HEPCGN_19570 lysR DNA-binding transcriptional regulator LysR 0.34 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 85
Escherichia coli ECRC62 0.51 BNILDI_10305 lysR DNA-binding transcriptional regulator LysR 0.35 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECOR27 0.51 NOLOHH_11825 lysR DNA-binding transcriptional regulator LysR 0.35 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase low > 57
Rahnella sp. WP5 0.51 EX31_RS13280 LysR family transcriptional regulator 0.32 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase low > 89
Escherichia coli ECRC99 0.51 KEDOAH_08190 lysR DNA-binding transcriptional regulator LysR 0.35 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC98 0.51 JDDGAC_23605 lysR DNA-binding transcriptional regulator LysR 0.35 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC102 0.51 NIAGMN_17710 lysR DNA-binding transcriptional regulator LysR 0.35 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC101 0.51 MCAODC_10465 lysR DNA-binding transcriptional regulator LysR 0.35 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli ECRC101 0.51 OKFHMN_19940 lysR DNA-binding transcriptional regulator LysR 0.35 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase — —
Erwinia tracheiphila SCR3 0.51 LU632_RS06035 LysR family transcriptional regulator 0.32 LU632_RS05860 5-formyltetrahydrofolate cyclo-ligase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00890 Octopine catabolism/uptake operon regulatory protein OccR 0.33 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase low > 73
Escherichia coli BL21 0.51 ECD_02687 transcriptional activator of lysA; autorepressor 0.33 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein 0.50 51
Escherichia coli BW25113 0.51 b2839 lysR DNA-binding transcriptional dual regulator (NCBI) 0.33 b2912 ygfA putative ligase (VIMSS) low > 76
Serratia liquefaciens MT49 0.50 IAI46_20525 LysR family transcriptional regulator 0.35 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase low > 86
Pantoea sp. MT58 0.50 IAI47_03855 LysR family transcriptional regulator 0.32 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase low > 76
Pectobacterium carotovorum WPP14 0.50 HER17_RS03705 LysR family transcriptional regulator 0.35 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1324 Transcriptional activator protein LysR 0.31 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) low > 78
Enterobacter sp. TBS_079 0.49 MPMX20_03706 Octopine catabolism/uptake operon regulatory protein OccR 0.34 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase low > 85
Klebsiella michiganensis M5al 0.47 BWI76_RS23365 LysR family transcriptional regulator 0.32 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase low > 92
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_2536 transcriptional regulator, LysR family 0.74 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_2536 transcriptional regulator, LysR family 0.74 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase low > 86
Agrobacterium fabrum C58 0.20 Atu5419 LysR family transcriptional regulator 0.20 Atu3731 5-formyltetrahydrofolate cyclo-ligase low > 89
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_08070 LysR family transcriptional regulator 0.74 AO353_08780 5-formyltetrahydrofolate cyclo-ligase low > 101
Ralstonia solanacearum UW163 0.19 UW163_RS11385 LysR family transcriptional regulator 0.17 UW163_RS03715 5-formyltetrahydrofolate cyclo-ligase — —
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS02340 LysR family transcriptional regulator 0.17 RALBFv3_RS09865 5-formyltetrahydrofolate cyclo-ligase low > 76
Pseudomonas stutzeri RCH2 0.19 Psest_2120 Transcriptional regulator 0.65 Psest_0170 5,10-methenyltetrahydrofolate synthetase low > 67

Not shown: 10 genomes with orthologs for PP_2078 only; 33 genomes with orthologs for PP_5203 only