Conservation of cofitness between PP_1326 and PP_1800 in Pseudomonas putida KT2440

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase 1.0 PP_1800 Oxidoreductase Rmd 0.56 15
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_15290 methyltransferase 0.25 AO353_10240 NAD-dependent dehydratase low > 101
Pseudomonas sp. RS175 0.84 PFR28_03597 Ribosomal RNA small subunit methyltransferase I 0.25 PFR28_04553 GDP-6-deoxy-D-mannose reductase low > 88
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_5346 rRNA small subunit methyltransferase I 0.24 Pf6N2E2_4243 UDP-glucose 4-epimerase (EC 5.1.3.2) low > 103
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_4112 Protein of unknown function UPF0011 0.75 Psyr_0915 NAD-dependent epimerase/dehydratase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_4112 Protein of unknown function UPF0011 0.75 Psyr_0915 NAD-dependent epimerase/dehydratase low > 86
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_17110 methyltransferase 0.27 AO356_11840 NAD-dependent dehydratase low > 104
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_1643 rRNA small subunit methyltransferase I 0.24 PfGW456L13_2339 UDP-glucose 4-epimerase (EC 5.1.3.2) low > 87
Pseudomonas sp. S08-1 0.76 OH686_08340 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.22 OH686_11985 GDP-mannose 4,6-dehydratase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.4371.1 rRNA small subunit methyltransferase I 0.57 Xcc-8004.4501.1 UDP-glucose 4-epimerase (EC 5.1.3.2) low > 74
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_11735 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.45 OKGIIK_01215 GDP-mannose 4,6 dehydratase low > 52
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS00655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.49 QEN71_RS25760 GDP-mannose 4,6-dehydratase low > 153
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS01940 16S rRNA methyltransferase 0.48 BPHYT_RS04260 GDP-6-deoxy-D-lyxo-4-hexulose reductase low > 109
Bosea sp. OAE506 0.37 ABIE41_RS03315 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.21 ABIE41_RS02905 GDP-mannose 4,6-dehydratase low > 77
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_02152 16S rRNA (cytidine1402-2'-O)-methyltransferase 0.49 H281DRAFT_04821 Nucleoside-diphosphate-sugar epimerase low > 103
Paraburkholderia graminis OAS925 0.35 ABIE53_000470 16S rRNA (cytidine1402-2'-O)-methyltransferase 0.49 ABIE53_001136 nucleoside-diphosphate-sugar epimerase low > 113
Rhodopseudomonas palustris CGA009 0.35 TX73_001680 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.18 TX73_020475 GDP-mannose 4,6-dehydratase low > 86
Ralstonia solanacearum PSI07 0.35 RPSI07_RS08730 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.50 RPSI07_RS19845 GDP-6-deoxy-D-lyxo-4-hexulose reductase low > 81
Variovorax sp. OAS795 0.34 ABID97_RS00285 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.43 ABID97_RS05700 GDP-mannose 4,6-dehydratase low > 91
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS13300 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.21 A4249_RS12985 GDP-mannose 4,6-dehydratase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF2715 rRNA small subunit methyltransferase I 0.16 GFF1854 UDP-glucose 4-epimerase (EC 5.1.3.2) low > 90

Not shown: 67 genomes with orthologs for PP_1326 only; 0 genomes with orthologs for PP_1800 only