Conservation of cofitness between PP_4402 and PP_1140 in Pseudomonas putida KT2440

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4402 branched-chain alpha-keto acid dehydrogenase complex, beta subunit 1.0 PP_1140 branched chain amino acid transporter - permease subunit 0.35 16
Pseudomonas sp. BP01 1.00 JOY50_RS00850 alpha-ketoacid dehydrogenase subunit beta 1.00 JOY50_RS24210 livH high-affinity branched-chain amino acid ABC transporter permease LivH low > 84
Pseudomonas sp. SVBP6 0.95 COO64_RS21460 alpha-ketoacid dehydrogenase subunit beta 0.92 COO64_RS17105 livH high-affinity branched-chain amino acid ABC transporter permease LivH low > 93
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_22985 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.88 AO356_05325 branched-chain amino acid transporter permease subunit LivH 0.22 75
Pseudomonas sp. DMC3 0.92 GFF1607 2-oxoisovalerate dehydrogenase subunit beta 0.87 GFF2185 High-affinity branched-chain amino acid transport system permease protein LivH low > 89
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_480 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) 0.89 Pf6N2E2_2923 ABC transporter for L-leucine/L-phenylalanine/D-alanine, permease component 1 LivH (from data) 0.37 26
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_26640 2-oxoisovalerate dehydrogenase 0.90 AO353_17120 branched-chain amino acid transporter permease subunit LivH 0.45 19
Pseudomonas sp. RS175 0.91 PFR28_02446 2-oxoisovalerate dehydrogenase subunit beta 0.91 PFR28_00539 High-affinity branched-chain amino acid transport system permease protein LivH low > 88
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_4479 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) 0.88 Pf1N1B4_3217 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) 0.31 24
Pseudomonas simiae WCS417 0.91 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.92 PS417_06610 branched-chain amino acid transporter permease subunit LivH — —
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.92 PFLU_RS06640 high-affinity branched-chain amino acid ABC transporter permease LivH low > 109
Pseudomonas fluorescens SBW25 0.90 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.92 PFLU_RS06640 high-affinity branched-chain amino acid ABC transporter permease LivH low > 109
Pseudomonas aeruginosa PA14 0.90 IKLFDK_11030 2-oxoisovalerate dehydrogenase subunit beta 0.79 IKLFDK_04925 high-affinity branched-chain amino acid ABC transporter permease LivH low > 101
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_3541 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.89 PfGW456L13_4608 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) low > 87
Variovorax sp. OAS795 0.84 ABID97_RS06675 alpha-ketoacid dehydrogenase subunit beta 0.56 ABID97_RS27580 branched-chain amino acid ABC transporter permease LivH low > 91
Castellaniella sp019104865 MT123 0.83 ABCV34_RS04970 alpha-ketoacid dehydrogenase subunit beta 0.58 ABCV34_RS03620 branched-chain amino acid ABC transporter permease LivH 0.98 5
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS33050 2-oxoisovalerate dehydrogenase 0.62 RR42_RS14420 branched-chain amino acid transporter permease subunit LivH low > 128

Not shown: 23 genomes with orthologs for PP_4402 only; 37 genomes with orthologs for PP_1140 only