Conservation of cofitness between PP_0792 and PP_0356 in Pseudomonas putida KT2440

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator 1.0 PP_0356 malate synthase G 0.20 9
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS04005 catabolite repressor/activator 0.85 PFLU_RS27685 malate synthase G low > 109
Pseudomonas fluorescens SBW25 0.78 PFLU_RS04005 catabolite repressor/activator 0.85 PFLU_RS27685 malate synthase G low > 109
Pseudomonas sp. RS175 0.78 PFR28_00104 Catabolite repressor/activator 0.86 PFR28_04110 Malate synthase G 0.49 15
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_1147 Fructose repressor FruR, LacI family 0.86 Pf1N1B4_2478 Malate synthase G (EC 2.3.3.9) low > 87
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_07340 transcriptional regulator 0.86 AO356_14100 malate synthase G low > 104
Pseudomonas simiae WCS417 0.77 PS417_03960 transcriptional regulator 0.86 PS417_26040 malate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_05490 transcriptional regulator 0.86 AO353_07560 malate synthase G low > 101
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_3340 Fructose repressor FruR, LacI family 0.86 Pf6N2E2_4752 Malate synthase G (EC 2.3.3.9) low > 103
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_5077 Fructose repressor FruR, LacI family 0.86 PfGW456L13_1139 Malate synthase G (EC 2.3.3.9) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0820 transcriptional regulator, LacI family 0.85 Psyr_4700 malate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0820 transcriptional regulator, LacI family 0.85 Psyr_4700 malate synthase low > 86
Pseudomonas stutzeri RCH2 0.57 Psest_3356 D-fructose-responsive transcription factor 0.84 Psest_0354 Malate synthase G (EC 2.3.3.9) (from data) low > 67
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_03579 Catabolite repressor/activator 0.60 OHPLBJKB_00731 Malate synthase G low > 73
Escherichia coli Nissle 1917 0.42 ECOLIN_RS00430 catabolite repressor/activator 0.59 ECOLIN_RS17120 malate synthase G low > 52
Escherichia coli BW25113 0.42 b0080 fruR DNA-binding transcriptional dual regulator (NCBI) 0.60 b2976 glcB malate synthase (NCBI) low > 76
Escherichia fergusonii Becca 0.42 EFB2_03967 Catabolite repressor/activator 0.59 EFB2_00839 Malate synthase G low > 86
Escherichia coli BL21 0.42 ECD_00081 transcriptional repressor-activator for carbon metabolism 0.60 ECD_02844 malate synthase G low > 60
Escherichia coli ECOR27 0.42 NOLOHH_03030 cra catabolite repressor/activator 0.60 NOLOHH_10940 glcB malate synthase G low > 57
Escherichia coli ECRC62 0.42 BNILDI_08580 cra catabolite repressor/activator 0.59 BNILDI_00575 glcB malate synthase G — —
Escherichia coli ECOR38 0.42 HEPCGN_08665 cra catabolite repressor/activator 0.60 HEPCGN_18015 glcB malate synthase G low > 85
Agrobacterium fabrum C58 0.17 Atu4743 LacI family transcriptional regulator 0.68 Atu0047 malate synthase G 0.28 12
Sinorhizobium meliloti 1021 0.17 SM_b20483 catabolite repressor protein 0.69 SMc02581 malate synthase G 0.31 36

Not shown: 18 genomes with orthologs for PP_0792 only; 23 genomes with orthologs for PP_0356 only