Conservation of cofitness between PP_0305 and PP_0302 in Pseudomonas putida KT2440

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0305 HTH-type transcriptional regulator CdhR 1.0 PP_0302 L-carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) 0.24 3
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_07735 AraC family transcriptional regulator 0.91 AO353_07750 carnitine 3-dehydrogenase [EC:1.1.1.108] (from data) 0.57 11
Pseudomonas simiae WCS417 0.74 PS417_26270 AraC family transcriptional regulator 0.90 PS417_26285 3-hydroxybutyryl-CoA dehydrogenase low > 88
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_1097 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.91 PfGW456L13_1094 Carnitine 3-dehydrogenase (EC 1.1.1.108) @ 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) @ 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) low > 87
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS27925 GlxA family transcriptional regulator 0.90 PFLU_RS27940 L-carnitine dehydrogenase 0.52 2
Pseudomonas fluorescens SBW25 0.73 PFLU_RS27925 GlxA family transcriptional regulator 0.90 PFLU_RS27940 L-carnitine dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_13860 AraC family transcriptional regulator 0.90 AO356_13845 Carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) 0.80 9
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_2915 transcriptional regulator, AraC family with amidase-like domain protein 0.86 Psyr_2918 3-hydroxyacyl-CoA dehydrogenase, C-terminal:3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_2915 transcriptional regulator, AraC family with amidase-like domain protein 0.86 Psyr_2918 3-hydroxyacyl-CoA dehydrogenase, C-terminal:3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein 0.34 69
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_2432 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.91 Pf1N1B4_2429 Carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) 0.27 21
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_4694 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 0.89 Pf6N2E2_4690 L-carnitine 3-dehydrogenase, A subunit (EC 1.1.1.108) (from data) 0.63 10
Pseudomonas sp. RS175 0.71 PFR28_04154 HTH-type transcriptional regulator CdhR 0.89 PFR28_04157 L-carnitine dehydrogenase 0.69 2
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_03176 transcriptional regulator, AraC family with amidase-like domain 0.78 H281DRAFT_03173 carnitine 3-dehydrogenase low > 103
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS22395 AraC family transcriptional regulator 0.76 BPHYT_RS22380 Carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) 0.36 4
Paraburkholderia graminis OAS925 0.61 ABIE53_004121 AraC family carnitine catabolism transcriptional activator 0.78 ABIE53_004124 carnitine 3-dehydrogenase low > 113
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS08390 GlxA family transcriptional regulator 0.78 QEN71_RS08405 L-carnitine dehydrogenase low > 153

Not shown: 0 genomes with orthologs for PP_0305 only; 7 genomes with orthologs for PP_0302 only