Conservation of cofitness between PP_2078 and PP_0089 in Pseudomonas putida KT2440

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2078 transcriptional activator protein LysR 1.0 PP_0089 stress-induced peroxiredoxin, lipoyl-dependent peroxidase 0.18 10
Escherichia coli Nissle 1917 0.52 ECOLIN_RS15935 DNA-binding transcriptional regulator LysR 0.60 ECOLIN_RS08540 peroxiredoxin OsmC — —
Escherichia coli ECOR38 0.52 HEPCGN_19570 lysR DNA-binding transcriptional regulator LysR 0.60 HEPCGN_26450 osmC peroxiredoxin OsmC — —
Escherichia fergusonii Becca 0.52 EFB2_01044 Octopine catabolism/uptake operon regulatory protein OccR 0.60 EFB2_02509 Peroxiredoxin OsmC low > 86
Escherichia coli ECOR27 0.51 NOLOHH_11825 lysR DNA-binding transcriptional regulator LysR 0.60 NOLOHH_19020 osmC peroxiredoxin OsmC — —
Escherichia coli ECRC62 0.51 BNILDI_10305 lysR DNA-binding transcriptional regulator LysR 0.60 BNILDI_17505 osmC peroxiredoxin OsmC — —
Rahnella sp. WP5 0.51 EX31_RS13280 LysR family transcriptional regulator 0.63 EX31_RS02380 OsmC family protein low > 89
Escherichia coli ECRC98 0.51 JDDGAC_23605 lysR DNA-binding transcriptional regulator LysR 0.59 JDDGAC_03835 osmC peroxiredoxin OsmC — —
Escherichia coli ECRC101 0.51 MCAODC_10465 lysR DNA-binding transcriptional regulator LysR 0.59 MCAODC_16595 osmC peroxiredoxin OsmC — —
Escherichia coli ECRC99 0.51 KEDOAH_08190 lysR DNA-binding transcriptional regulator LysR 0.59 KEDOAH_27095 osmC peroxiredoxin OsmC — —
Escherichia coli ECRC102 0.51 NIAGMN_17710 lysR DNA-binding transcriptional regulator LysR 0.59 NIAGMN_25475 osmC peroxiredoxin OsmC — —
Escherichia coli ECRC101 0.51 OKFHMN_19940 lysR DNA-binding transcriptional regulator LysR 0.59 OKFHMN_01345 osmC peroxiredoxin OsmC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00890 Octopine catabolism/uptake operon regulatory protein OccR 0.60 OHPLBJKB_02235 Peroxiredoxin OsmC — —
Escherichia coli BL21 0.51 ECD_02687 transcriptional activator of lysA; autorepressor 0.60 ECD_01440 lipoyl-dependent Cys-based peroxidase, hydroperoxide resistance; salt-shock inducible membrane protein; peroxiredoxin — —
Escherichia coli BW25113 0.51 b2839 lysR DNA-binding transcriptional dual regulator (NCBI) 0.60 b1482 osmC osmotically inducible, stress-inducible membrane protein (NCBI) low > 76
Pantoea sp. MT58 0.50 IAI47_03855 LysR family transcriptional regulator 0.63 IAI47_15015 OsmC family protein low > 76
Pectobacterium carotovorum WPP14 0.50 HER17_RS03705 LysR family transcriptional regulator 0.62 HER17_RS10595 OsmC family protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1324 Transcriptional activator protein LysR 0.60 GFF2553 Osmotically inducible protein C low > 78
Enterobacter sp. TBS_079 0.49 MPMX20_03706 Octopine catabolism/uptake operon regulatory protein OccR 0.64 MPMX20_02363 Peroxiredoxin OsmC low > 85
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS35085 transcriptional regulator 0.64 BPHYT_RS27155 peroxiredoxin low > 109
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2917 Transcriptional regulator 0.62 EX28DRAFT_1109 peroxiredoxin, OsmC subfamily low > 76
Klebsiella michiganensis M5al 0.47 BWI76_RS23365 LysR family transcriptional regulator 0.61 BWI76_RS13855 peroxiredoxin low > 92
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS33285 LysR substrate-binding domain-containing protein 0.58 QEN71_RS10960 OsmC family protein low > 153
Variovorax sp. OAS795 0.25 ABID97_RS25700 LysR substrate-binding domain-containing protein 0.48 ABID97_RS21090 OsmC family protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_2536 transcriptional regulator, LysR family 0.69 Psyr_0040 OsmC-like protein low > 86
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_2536 transcriptional regulator, LysR family 0.69 Psyr_0040 OsmC-like protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_08070 LysR family transcriptional regulator 0.73 AO353_10740 osmotically inducible protein OsmC low > 101
Pseudomonas stutzeri RCH2 0.19 Psest_2120 Transcriptional regulator 0.85 Psest_4010 peroxiredoxin, OsmC subfamily low > 67

Not shown: 11 genomes with orthologs for PP_2078 only; 29 genomes with orthologs for PP_0089 only