Conservation of cofitness between PFLU_RS24465 and PFLU_RS12905 in Pseudomonas fluorescens SBW25

19 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS24465 DUF481 domain-containing protein 1.0 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.85 12
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS24465 DUF481 domain-containing protein 1.00 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.35 11
Pseudomonas simiae WCS417 0.97 PS417_22805 hypothetical protein 0.98 PS417_12215 lytic transglycosylase low > 88
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3170 Peptide chain release factor RF-3 0.80 Pf1N1B4_4595 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_2969 Peptide chain release factor RF-3 0.78 Pf6N2E2_586 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_05545 peptide chain release factor RF-3 0.80 AO356_24475 lytic transglycosylase low > 104
Pseudomonas sp. RS175 0.85 PFR28_00497 hypothetical protein 0.79 PFR28_01551 Membrane-bound lytic murein transglycosylase D low > 88
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_4643 Peptide chain release factor RF-3 0.79 PfGW456L13_3341 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) low > 87
Pseudomonas putida KT2440 0.79 PP_1357 conserved protein of unknown function 0.66 PP_4145 Membrane-bound lytic murein transglycosylase D low > 96
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_4076 conserved hypothetical protein 0.72 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_4076 conserved hypothetical protein 0.72 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N low > 86
Pseudomonas stutzeri RCH2 0.72 Psest_1146 Protein of unknown function, DUF481. 0.53 Psest_2070 FOG: LysM repeat low > 67
Pseudomonas sp. S08-1 0.58 OH686_08185 hypothetical protein 0.55 OH686_03585 Membrane-bound lytic murein transglycosylase D low > 80
Pectobacterium carotovorum WPP14 0.46 HER17_RS09750 DUF481 domain-containing protein 0.29 HER17_RS05450 murein transglycosylase D low > 75
Dickeya dianthicola ME23 0.42 DZA65_RS12500 DUF481 domain-containing protein 0.31 DZA65_RS17270 murein transglycosylase D low > 75
Dickeya dianthicola 67-19 0.42 HGI48_RS12050 DUF481 domain-containing protein 0.32 HGI48_RS16185 murein transglycosylase D low > 71
Dickeya dadantii 3937 0.42 DDA3937_RS11960 DUF481 domain-containing protein 0.32 DDA3937_RS16065 murein transglycosylase D low > 74
Pantoea sp. MT58 0.38 IAI47_14180 DUF481 domain-containing protein 0.28 IAI47_15345 murein transglycosylase D low > 76
Shewanella sp. ANA-3 0.15 Shewana3_0114 hypothetical protein (RefSeq) 0.29 Shewana3_2370 MltD domain-containing protein (RefSeq)
Shewanella oneidensis MR-1 0.15 SO0113 conserved hypothetical protein (NCBI ptt file) 0.29 SO2564 transglycosylase, Slt family (NCBI ptt file) low > 76

Not shown: 0 genomes with orthologs for PFLU_RS24465 only; 33 genomes with orthologs for PFLU_RS12905 only