Conservation of cofitness between OKFHMN_02265 and OKFHMN_22660 in Escherichia coli ECRC100

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_02265 pgrR DNA-binding transcriptional regulator PgrR 1.0 OKFHMN_22660 pdxB 4-phosphoerythronate dehydrogenase PdxB 0.75 13
Escherichia coli ECRC98 1.00 JDDGAC_04810 pgrR DNA-binding transcriptional regulator PgrR 1.00 JDDGAC_26620 pdxB 4-phosphoerythronate dehydrogenase PdxB low > 86
Escherichia coli ECRC101 1.00 MCAODC_16005 pgrR DNA-binding transcriptional regulator PgrR 1.00 MCAODC_13700 pdxB 4-phosphoerythronate dehydrogenase PdxB low > 87
Escherichia coli ECRC102 1.00 NIAGMN_26435 pgrR DNA-binding transcriptional regulator PgrR 1.00 NIAGMN_20435 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli ECRC99 1.00 KEDOAH_26505 pgrR DNA-binding transcriptional regulator PgrR 1.00 KEDOAH_05535 pdxB 4-phosphoerythronate dehydrogenase PdxB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02353 HTH-type transcriptional regulator PgrR 0.99 OHPLBJKB_01385 Erythronate-4-phosphate dehydrogenase low > 73
Escherichia coli BL21 1.00 ECD_01306 murein peptide degradation regulator 0.98 ECD_02245 erythronate-4-phosphate dehydrogenase — —
Escherichia coli BW25113 1.00 b1328 ycjZ predicted DNA-binding transcriptional regulator (NCBI) 0.98 b2320 pdxB erythronate-4-phosphate dehydrogenase (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_19965 pgrR DNA-binding transcriptional regulator PgrR 0.99 NOLOHH_14295 pdxB 4-phosphoerythronate dehydrogenase PdxB low > 75
Escherichia coli ECRC62 1.00 BNILDI_18115 pgrR DNA-binding transcriptional regulator PgrR 0.99 BNILDI_13215 pdxB 4-phosphoerythronate dehydrogenase PdxB low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS07975 DNA-binding transcriptional regulator PgrR 0.99 ECOLIN_RS13445 4-phosphoerythronate dehydrogenase PdxB low > 55
Escherichia fergusonii Becca 0.99 EFB2_02598 HTH-type transcriptional regulator PgrR 0.98 EFB2_01538 Erythronate-4-phosphate dehydrogenase low > 86
Dickeya dianthicola ME23 0.68 DZA65_RS07300 LysR family transcriptional regulator 0.71 DZA65_RS15380 4-phosphoerythronate dehydrogenase PdxB low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS12385 LysR family transcriptional regulator 0.72 DDA3937_RS14475 4-phosphoerythronate dehydrogenase PdxB low > 74
Dickeya dianthicola 67-19 0.67 HGI48_RS06955 LysR family transcriptional regulator 0.68 HGI48_RS14445 4-phosphoerythronate dehydrogenase PdxB low > 71
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_24055 LysR family transcriptional regulator 0.38 AO356_02365 erythronate-4-phosphate dehydrogenase — —
Pectobacterium carotovorum WPP14 0.53 HER17_RS06580 LysR family transcriptional regulator 0.68 HER17_RS06980 4-phosphoerythronate dehydrogenase PdxB low > 75
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1046 Transcriptional regulator 0.84 EX28DRAFT_0284 Phosphoglycerate dehydrogenase and related dehydrogenases low > 76
Escherichia coli ECOR38 0.51 HEPCGN_07680 lysR LysR family transcriptional regulator 0.95 HEPCGN_21865 pdxB 4-phosphoerythronate dehydrogenase PdxB low > 87
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_4966 Transcriptional regulator, LysR family 0.40 Pf1N1B4_3893 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Pseudomonas sp. RS175 0.51 PFR28_02305 HTH-type transcriptional regulator PgrR 0.38 PFR28_01103 Erythronate-4-phosphate dehydrogenase — —
Serratia liquefaciens MT49 0.50 IAI46_12365 LysR family transcriptional regulator 0.70 IAI46_17850 4-phosphoerythronate dehydrogenase PdxB low > 86
Rahnella sp. WP5 0.50 EX31_RS20830 LysR family transcriptional regulator 0.71 EX31_RS19610 4-phosphoerythronate dehydrogenase PdxB low > 89
Klebsiella michiganensis M5al 0.49 BWI76_RS18485 LysR family transcriptional regulator 0.82 BWI76_RS20390 erythronate-4-phosphate dehydrogenase low > 92
Enterobacter sp. TBS_079 0.49 MPMX20_02525 HTH-type transcriptional regulator PgrR 0.83 MPMX20_03255 Erythronate-4-phosphate dehydrogenase low > 85
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3801 transcriptional regulator, LysR family 0.44 Psyr_1828 4-phosphoerythronate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3801 transcriptional regulator, LysR family 0.44 Psyr_1828 4-phosphoerythronate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_1914 Transcriptional regulator, LysR family 0.38 Pf6N2E2_2297 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) — —
Pantoea sp. MT58 0.39 IAI47_21445 LysR family transcriptional regulator 0.74 IAI47_06235 4-phosphoerythronate dehydrogenase PdxB low > 76

Not shown: 23 genomes with orthologs for OKFHMN_02265 only; 25 genomes with orthologs for OKFHMN_22660 only