Conservation of cofitness between OKFHMN_14560 and OKFHMN_17955 in Escherichia coli ECRC100

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_14560 rffG dTDP-glucose 4,6-dehydratase 1.0 OKFHMN_17955 lptC LPS export ABC transporter periplasmic protein LptC 0.92 20
Escherichia coli ECRC101 1.00 MCAODC_05065 rffG dTDP-glucose 4,6-dehydratase 1.00 MCAODC_08475 lptC LPS export ABC transporter periplasmic protein LptC 0.73 40
Escherichia coli ECRC98 1.00 JDDGAC_18185 rffG dTDP-glucose 4,6-dehydratase 0.99 JDDGAC_21580 lptC LPS export ABC transporter periplasmic protein LptC low > 86
Escherichia coli ECRC102 1.00 NIAGMN_12315 rffG dTDP-glucose 4,6-dehydratase 1.00 NIAGMN_15715 lptC LPS export ABC transporter periplasmic protein LptC
Escherichia coli ECRC99 1.00 KEDOAH_13590 rffG dTDP-glucose 4,6-dehydratase 1.00 KEDOAH_10195 lptC LPS export ABC transporter periplasmic protein LptC
Escherichia coli ECOR27 0.99 NOLOHH_06695 rffG dTDP-glucose 4,6-dehydratase 1.00 NOLOHH_09755 lptC LPS export ABC transporter periplasmic protein LptC 0.83 15
Escherichia coli BW25113 0.99 b3788 rffG dTDP-glucose 4,6-dehydratase (NCBI) 1.00 b3199 yrbK hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04266 dTDP-glucose 4,6-dehydratase 2 1.00 OHPLBJKB_00501 Lipopolysaccharide export system protein LptC low > 73
Escherichia coli BL21 0.99 ECD_03666 dTDP-glucose 4,6-dehydratase 0.99 ECD_03064 periplasmic membrane-anchored LPS-binding protein; LPS export protein low > 61
Escherichia coli ECRC62 0.98 BNILDI_04830 rffG dTDP-glucose 4,6-dehydratase 1.00 BNILDI_01780 lptC LPS export ABC transporter periplasmic protein LptC 0.73 61
Escherichia fergusonii Becca 0.98 EFB2_04851 dTDP-glucose 4,6-dehydratase 2 1.00 EFB2_00624 Lipopolysaccharide export system protein LptC low > 86
Escherichia coli ECOR38 0.98 HEPCGN_13270 rffG dTDP-glucose 4,6-dehydratase 0.99 HEPCGN_16830 lptC LPS export ABC transporter periplasmic protein LptC low > 87
Escherichia coli Nissle 1917 0.98 ECOLIN_RS21745 dTDP-glucose 4,6-dehydratase 1.00 ECOLIN_RS18410 LPS export ABC transporter periplasmic protein LptC
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF2885 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.93 GFF2943 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters low > 78
Pectobacterium carotovorum WPP14 0.84 HER17_RS01165 dTDP-glucose 4,6-dehydratase 0.61 HER17_RS20045 LPS export ABC transporter periplasmic protein LptC
Serratia liquefaciens MT49 0.84 IAI46_00610 dTDP-glucose 4,6-dehydratase 0.66 IAI46_22455 LPS export ABC transporter periplasmic protein LptC
Dickeya dadantii 3937 0.80 DDA3937_RS06735 dTDP-glucose 4,6-dehydratase 0.57 DDA3937_RS01545 LPS export ABC transporter periplasmic protein LptC
Dickeya dianthicola 67-19 0.80 HGI48_RS06755 dTDP-glucose 4,6-dehydratase 0.56 HGI48_RS01460 LPS export ABC transporter periplasmic protein LptC
Pantoea sp. MT58 0.80 IAI47_18500 dTDP-glucose 4,6-dehydratase 0.67 IAI47_17170 LPS export ABC transporter periplasmic protein LptC
Dickeya dianthicola ME23 0.80 DZA65_RS07110 dTDP-glucose 4,6-dehydratase 0.56 DZA65_RS01525 LPS export ABC transporter periplasmic protein LptC low > 75
Rahnella sp. WP5 0.79 EX31_RS11515 dTDP-glucose 4,6-dehydratase 0.60 EX31_RS12415 LPS export ABC transporter periplasmic protein LptC
Shewanella loihica PV-4 0.76 Shew_1401 dTDP-glucose 4,6 dehydratase (RefSeq) 0.18 Shew_3308 hypothetical protein (RefSeq)
Klebsiella michiganensis M5al 0.76 BWI76_RS19065 dTDP-glucose 4,6-dehydratase 0.85 BWI76_RS25250 LPS export ABC transporter periplasmic protein LptC
Alteromonas macleodii MIT1002 0.75 MIT1002_03557 dTDP-glucose 4,6-dehydratase 0.22 MIT1002_00830 Lipopolysaccharide export system protein LptC
Shewanella oneidensis MR-1 0.73 SO3188 rfbB dTDP-glucose 4,6-dehydratase (NCBI ptt file) 0.18 SO3958 conserved hypothetical protein (NCBI ptt file)
Shewanella sp. ANA-3 0.73 Shewana3_1379 dTDP-glucose 4,6 dehydratase (RefSeq) 0.18 Shewana3_0675 hypothetical protein (RefSeq)
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0515 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.88 EX28DRAFT_3253 Uncharacterized protein conserved in bacteria
Enterobacter sp. TBS_079 0.71 MPMX20_03013 dTDP-glucose 4,6-dehydratase 0.87 MPMX20_04105 Lipopolysaccharide export system protein LptC low > 85
Erwinia tracheiphila SCR3 0.68 LU632_RS08850 rfbB dTDP-glucose 4,6-dehydratase 0.64 LU632_RS21265 lptC LPS export ABC transporter periplasmic protein LptC
Shewanella amazonensis SB2B 0.65 Sama_2242 dTDP-glucose 4,6-dehydratase (RefSeq) 0.20 Sama_3085 hypothetical protein (RefSeq)

Not shown: 69 genomes with orthologs for OKFHMN_14560 only; 1 genomes with orthologs for OKFHMN_17955 only