Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECRC100 | 1.0 | OKFHMN_14560 | rffG | dTDP-glucose 4,6-dehydratase | 1.0 | OKFHMN_17955 | lptC | LPS export ABC transporter periplasmic protein LptC | 0.92 | 20 |
Escherichia coli ECRC101 | 1.00 | MCAODC_05065 | rffG | dTDP-glucose 4,6-dehydratase | 1.00 | MCAODC_08475 | lptC | LPS export ABC transporter periplasmic protein LptC | 0.73 | 40 |
Escherichia coli ECRC98 | 1.00 | JDDGAC_18185 | rffG | dTDP-glucose 4,6-dehydratase | 0.99 | JDDGAC_21580 | lptC | LPS export ABC transporter periplasmic protein LptC | low | > 86 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_12315 | rffG | dTDP-glucose 4,6-dehydratase | 1.00 | NIAGMN_15715 | lptC | LPS export ABC transporter periplasmic protein LptC | — | — |
Escherichia coli ECRC99 | 1.00 | KEDOAH_13590 | rffG | dTDP-glucose 4,6-dehydratase | 1.00 | KEDOAH_10195 | lptC | LPS export ABC transporter periplasmic protein LptC | — | — |
Escherichia coli ECOR27 | 0.99 | NOLOHH_06695 | rffG | dTDP-glucose 4,6-dehydratase | 1.00 | NOLOHH_09755 | lptC | LPS export ABC transporter periplasmic protein LptC | 0.83 | 15 |
Escherichia coli BW25113 | 0.99 | b3788 | rffG | dTDP-glucose 4,6-dehydratase (NCBI) | 1.00 | b3199 | yrbK | hypothetical protein (NCBI) | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | 1.00 | OHPLBJKB_00501 | | Lipopolysaccharide export system protein LptC | low | > 73 |
Escherichia coli BL21 | 0.99 | ECD_03666 | | dTDP-glucose 4,6-dehydratase | 0.99 | ECD_03064 | | periplasmic membrane-anchored LPS-binding protein; LPS export protein | low | > 61 |
Escherichia coli ECRC62 | 0.98 | BNILDI_04830 | rffG | dTDP-glucose 4,6-dehydratase | 1.00 | BNILDI_01780 | lptC | LPS export ABC transporter periplasmic protein LptC | 0.73 | 61 |
Escherichia fergusonii Becca | 0.98 | EFB2_04851 | | dTDP-glucose 4,6-dehydratase 2 | 1.00 | EFB2_00624 | | Lipopolysaccharide export system protein LptC | low | > 86 |
Escherichia coli ECOR38 | 0.98 | HEPCGN_13270 | rffG | dTDP-glucose 4,6-dehydratase | 0.99 | HEPCGN_16830 | lptC | LPS export ABC transporter periplasmic protein LptC | low | > 87 |
Escherichia coli Nissle 1917 | 0.98 | ECOLIN_RS21745 | | dTDP-glucose 4,6-dehydratase | 1.00 | ECOLIN_RS18410 | | LPS export ABC transporter periplasmic protein LptC | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.90 | GFF2885 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | 0.93 | GFF2943 | | Uncharacterized protein YrbK clustered with lipopolysaccharide transporters | low | > 78 |
Pectobacterium carotovorum WPP14 | 0.84 | HER17_RS01165 | | dTDP-glucose 4,6-dehydratase | 0.61 | HER17_RS20045 | | LPS export ABC transporter periplasmic protein LptC | — | — |
Serratia liquefaciens MT49 | 0.84 | IAI46_00610 | | dTDP-glucose 4,6-dehydratase | 0.66 | IAI46_22455 | | LPS export ABC transporter periplasmic protein LptC | — | — |
Dickeya dadantii 3937 | 0.80 | DDA3937_RS06735 | | dTDP-glucose 4,6-dehydratase | 0.57 | DDA3937_RS01545 | | LPS export ABC transporter periplasmic protein LptC | — | — |
Dickeya dianthicola 67-19 | 0.80 | HGI48_RS06755 | | dTDP-glucose 4,6-dehydratase | 0.56 | HGI48_RS01460 | | LPS export ABC transporter periplasmic protein LptC | — | — |
Pantoea sp. MT58 | 0.80 | IAI47_18500 | | dTDP-glucose 4,6-dehydratase | 0.67 | IAI47_17170 | | LPS export ABC transporter periplasmic protein LptC | — | — |
Dickeya dianthicola ME23 | 0.80 | DZA65_RS07110 | | dTDP-glucose 4,6-dehydratase | 0.56 | DZA65_RS01525 | | LPS export ABC transporter periplasmic protein LptC | low | > 75 |
Rahnella sp. WP5 | 0.79 | EX31_RS11515 | | dTDP-glucose 4,6-dehydratase | 0.60 | EX31_RS12415 | | LPS export ABC transporter periplasmic protein LptC | — | — |
Shewanella loihica PV-4 | 0.76 | Shew_1401 | | dTDP-glucose 4,6 dehydratase (RefSeq) | 0.18 | Shew_3308 | | hypothetical protein (RefSeq) | — | — |
Klebsiella michiganensis M5al | 0.76 | BWI76_RS19065 | | dTDP-glucose 4,6-dehydratase | 0.85 | BWI76_RS25250 | | LPS export ABC transporter periplasmic protein LptC | — | — |
Alteromonas macleodii MIT1002 | 0.75 | MIT1002_03557 | | dTDP-glucose 4,6-dehydratase | 0.22 | MIT1002_00830 | | Lipopolysaccharide export system protein LptC | — | — |
Shewanella oneidensis MR-1 | 0.73 | SO3188 | rfbB | dTDP-glucose 4,6-dehydratase (NCBI ptt file) | 0.18 | SO3958 | | conserved hypothetical protein (NCBI ptt file) | — | — |
Shewanella sp. ANA-3 | 0.73 | Shewana3_1379 | | dTDP-glucose 4,6 dehydratase (RefSeq) | 0.18 | Shewana3_0675 | | hypothetical protein (RefSeq) | — | — |
Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_0515 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | 0.88 | EX28DRAFT_3253 | | Uncharacterized protein conserved in bacteria | — | — |
Enterobacter sp. TBS_079 | 0.71 | MPMX20_03013 | | dTDP-glucose 4,6-dehydratase | 0.87 | MPMX20_04105 | | Lipopolysaccharide export system protein LptC | low | > 85 |
Erwinia tracheiphila SCR3 | 0.68 | LU632_RS08850 | rfbB | dTDP-glucose 4,6-dehydratase | 0.64 | LU632_RS21265 | lptC | LPS export ABC transporter periplasmic protein LptC | — | — |
Shewanella amazonensis SB2B | 0.65 | Sama_2242 | | dTDP-glucose 4,6-dehydratase (RefSeq) | 0.20 | Sama_3085 | | hypothetical protein (RefSeq) | — | — |
Not shown: 69 genomes with orthologs for OKFHMN_14560 only; 1 genomes with orthologs for OKFHMN_17955 only