Conservation of cofitness between NOLOHH_13070 and NOLOHH_09845 in Escherichia coli ECOR27

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_13070 rseC SoxR-reducing system protein RseC 1.0 NOLOHH_09845 greA transcription elongation factor GreA 0.67 19
Escherichia coli ECRC101 1.00 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_08565 greA transcription elongation factor GreA 0.58 65
Escherichia coli BW25113 1.00 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) 0.26 27
Escherichia coli ECRC98 1.00 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.00 JDDGAC_21670 greA transcription elongation factor GreA 0.94 23
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_00519 Transcription elongation factor GreA low > 73
Escherichia coli ECRC99 1.00 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_10105 greA transcription elongation factor GreA — —
Escherichia coli ECRC102 1.00 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_15805 greA transcription elongation factor GreA — —
Escherichia coli ECRC100 1.00 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_18045 greA transcription elongation factor GreA 0.88 2
Escherichia coli ECRC62 1.00 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.00 BNILDI_01690 greA transcription elongation factor GreA low > 75
Escherichia coli BL21 1.00 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_03046 transcript cleavage factor 0.69 24
Escherichia fergusonii Becca 1.00 EFB2_01326 Protein RseC 1.00 EFB2_00642 Transcription elongation factor GreA 0.55 45
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14545 SoxR-reducing system protein RseC 1.00 ECOLIN_RS18320 transcription elongation factor GreA — —
Escherichia coli ECOR38 0.99 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.00 HEPCGN_16920 greA transcription elongation factor GreA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.98 GFF2922 Transcription elongation factor GreA 0.74 25
Klebsiella michiganensis M5al 0.78 BWI76_RS21340 SoxR reducing system protein RseC 0.97 BWI76_RS25160 transcription elongation factor GreA low > 92
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.97 EX28DRAFT_3232 transcription elongation factor GreA low > 76
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.97 MPMX20_04085 Transcription elongation factor GreA low > 85
Pantoea sp. MT58 0.63 IAI47_04865 SoxR-reducing system protein RseC 0.86 IAI47_17080 transcription elongation factor GreA low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.90 EX31_RS08595 transcription elongation factor GreA low > 89
Serratia liquefaciens MT49 0.53 IAI46_19570 SoxR-reducing system protein RseC 0.89 IAI46_01880 transcription elongation factor GreA 0.51 19
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.79 LU632_RS21165 greA transcription elongation factor GreA — —
Pectobacterium carotovorum WPP14 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.92 HER17_RS18330 transcription elongation factor GreA — —
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.90 DDA3937_RS03015 transcription elongation factor GreA — —
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.90 HGI48_RS03185 transcription elongation factor GreA — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.90 DZA65_RS03180 transcription elongation factor GreA — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.75 SO1191 greA transcription elongation factor GreA (NCBI ptt file) — —
Shewanella loihica PV-4 0.21 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.72 Shew_2837 transcription elongation factor GreA (RefSeq) — —
Marinobacter adhaerens HP15 0.20 HP15_778 positive regulator of sigma E, RseC/MucC 0.64 HP15_3076 protein containing prokaryotic transcription elongation factor GreA domain — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.64 Psest_0969 transcription elongation factor GreA — —
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.71 B158DRAFT_0617 transcription elongation factor GreA low > 40
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.78 MIT1002_01468 Transcript cleavage factor GreA low > 70
Magnetospirillum magneticum AMB-1 0.16 AMB_RS13145 positive regulator of sigma E activity 0.50 AMB_RS03610 transcription elongation factor GreA low > 64

Not shown: 0 genomes with orthologs for NOLOHH_13070 only; 66 genomes with orthologs for NOLOHH_09845 only