Conservation of cofitness between MPMX20_02507 and MPMX20_03751 in Enterobacter sp. TBS_079

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter sp. TBS_079 1.0 MPMX20_02507 Ribosomal large subunit pseudouridine synthase B 1.0 MPMX20_03751 Single-stranded-DNA-specific exonuclease RecJ 0.32 7
Enterobacter asburiae PDN3 1.00 EX28DRAFT_0940 pseudouridine synthase 0.97 EX28DRAFT_2943 single-stranded-DNA-specific exonuclease RecJ low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) 0.89 GFF2989 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B 0.91 OHPLBJKB_00823 Single-stranded-DNA-specific exonuclease RecJ low > 73
Escherichia coli ECOR38 0.95 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.91 HEPCGN_18870 recJ single-stranded-DNA-specific exonuclease RecJ low > 87
Escherichia fergusonii Becca 0.95 EFB2_02658 Ribosomal large subunit pseudouridine synthase B 0.91 EFB2_01009 Single-stranded-DNA-specific exonuclease RecJ low > 86
Escherichia coli BW25113 0.95 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) 0.91 b2892 recJ ssDNA exonuclease, 5' --> 3'-specific (NCBI) 0.29 11
Escherichia coli Nissle 1917 0.95 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB 0.91 ECOLIN_RS16115 single-stranded-DNA-specific exonuclease RecJ low > 55
Escherichia coli BL21 0.95 ECD_01245 23S rRNA pseudouridine(2605) synthase 0.91 ECD_02724 ssDNA exonuclease, 5 low > 61
Escherichia coli ECRC102 0.94 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.91 NIAGMN_17345 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECOR27 0.94 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.91 NOLOHH_11505 recJ single-stranded-DNA-specific exonuclease RecJ low > 75
Escherichia coli ECRC98 0.94 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.91 JDDGAC_23220 recJ single-stranded-DNA-specific exonuclease RecJ low > 86
Escherichia coli ECRC101 0.94 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.91 MCAODC_10100 recJ single-stranded-DNA-specific exonuclease RecJ low > 87
Escherichia coli ECRC100 0.94 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.91 OKFHMN_19580 recJ single-stranded-DNA-specific exonuclease RecJ low > 80
Escherichia coli ECRC99 0.94 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.91 KEDOAH_08560 recJ single-stranded-DNA-specific exonuclease RecJ — —
Escherichia coli ECRC62 0.94 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.91 BNILDI_10035 recJ single-stranded-DNA-specific exonuclease RecJ low > 75
Klebsiella michiganensis M5al 0.93 BWI76_RS11880 23S rRNA pseudouridylate synthase B 0.88 BWI76_RS23805 ssDNA exonuclease RecJ low > 92
Erwinia tracheiphila SCR3 0.86 LU632_RS12730 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.73 LU632_RS05985 recJ single-stranded-DNA-specific exonuclease RecJ low > 74
Erwinia amylovora T8 0.85 OLJFJH_13510 23S rRNA pseudouridine(2605) synthase RluB 0.74 OLJFJH_08845 single-stranded-DNA-specific exonuclease RecJ low > 58
Pantoea sp. MT58 0.85 IAI47_09210 23S rRNA pseudouridine(2605) synthase RluB 0.77 IAI47_03830 single-stranded-DNA-specific exonuclease RecJ low > 76
Serratia liquefaciens MT49 0.85 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB 0.78 IAI46_20720 single-stranded-DNA-specific exonuclease RecJ low > 86
Pectobacterium carotovorum WPP14 0.82 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB 0.70 HER17_RS17880 single-stranded-DNA-specific exonuclease RecJ low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB 0.76 HGI48_RS03450 single-stranded-DNA-specific exonuclease RecJ low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB 0.76 DZA65_RS03495 single-stranded-DNA-specific exonuclease RecJ low > 75
Dickeya dadantii 3937 0.81 DDA3937_RS10500 23S rRNA pseudouridine(2605) synthase RluB 0.75 DDA3937_RS03310 single-stranded-DNA-specific exonuclease RecJ low > 74
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_05970 23S rRNA pseudouridylate synthase B 0.64 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ — —
Shewanella sp. ANA-3 0.65 Shewana3_1525 ribosomal large subunit pseudouridine synthase B (RefSeq) 0.57 Shewana3_3329 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 73
Shewanella amazonensis SB2B 0.64 Sama_2124 pseudouridine synthase, Rsu (RefSeq) 0.56 Sama_2737 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 62
Shewanella loihica PV-4 0.64 Shew_2246 pseudouridine synthase (RefSeq) 0.57 Shew_0772 single-stranded-DNA-specific exonuclease RecJ (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.55 MIT1002_01435 Ribosomal large subunit pseudouridine synthase B 0.53 MIT1002_00788 Single-stranded-DNA-specific exonuclease RecJ low > 70
Acinetobacter radioresistens SK82 0.49 MPMX26_02450 Ribosomal large subunit pseudouridine synthase B 0.42 MPMX26_02917 Single-stranded-DNA-specific exonuclease RecJ low > 36
Marinobacter adhaerens HP15 0.49 HP15_1530 RNA-binding S4 domain protein 0.48 HP15_766 bacterial RecJ exonuclease low > 73
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_2311 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) 0.48 B158DRAFT_2268 single-stranded-DNA-specific exonuclease RecJ low > 40

Not shown: 2 genomes with orthologs for MPMX20_02507 only; 61 genomes with orthologs for MPMX20_03751 only