Conservation of cofitness between MCAODC_14410 and MCAODC_13975 in Escherichia coli ECRC101

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.0 MCAODC_13975 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase 0.61 13
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A 0.99 OHPLBJKB_01446 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase low > 73
Escherichia coli BW25113 1.00 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) 0.99 b2264 menD 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA 0.99 ECOLIN_RS13185 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase — —
Escherichia fergusonii Becca 1.00 EFB2_01673 Ribosomal small subunit pseudouridine synthase A 0.99 EFB2_01591 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase low > 86
Escherichia coli ECRC62 1.00 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.99 BNILDI_13475 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 75
Escherichia coli BL21 1.00 ECD_02113 16S rRNA pseudouridine(516) synthase 0.99 ECD_02191 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; SEPHCHC synthase low > 61
Escherichia coli ECRC98 1.00 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 JDDGAC_26900 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 86
Escherichia coli ECRC99 1.00 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 KEDOAH_05260 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase — —
Escherichia coli ECRC100 1.00 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 OKFHMN_22935 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 80
Escherichia coli ECOR27 1.00 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.99 NOLOHH_14560 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 75
Escherichia coli ECRC102 1.00 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA 1.00 NIAGMN_20705 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase — —
Escherichia coli ECOR38 0.99 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.99 HEPCGN_22150 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) 0.92 GFF1870 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_0378 pseudouridine synthase 0.84 EX28DRAFT_0340 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A 0.85 MPMX20_03200 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS19810 16S rRNA pseudouridine(516) synthase 0.85 BWI76_RS20075 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase — —
Serratia liquefaciens MT49 0.83 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA 0.71 IAI46_17560 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 86
Erwinia tracheiphila SCR3 0.82 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA 0.61 LU632_RS08105 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 74
Dickeya dadantii 3937 0.81 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA 0.66 DDA3937_RS05915 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 74
Pectobacterium carotovorum WPP14 0.81 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA 0.68 HER17_RS15555 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 75
Dickeya dianthicola 67-19 0.80 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA 0.66 HGI48_RS05960 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA 0.65 DZA65_RS06295 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 75
Rahnella sp. WP5 0.79 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA 0.64 EX31_RS19355 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 89
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_08220 16S rRNA pseudouridine(516) synthase 0.38 CSW01_09860 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase low > 62
Shewanella loihica PV-4 0.54 Shew_2975 pseudouridine synthase (RefSeq) 0.33 Shew_3599 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase (RefSeq) low > 60
Shewanella sp. ANA-3 0.54 Shewana3_0760 ribosomal small subunit pseudouridine synthase A (RefSeq) 0.34 Shewana3_3965 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.51 Sama_2614 pseudouridine synthase, Rsu (RefSeq) 0.35 Sama_3460 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase (RefSeq) 0.36 12
Dechlorosoma suillum PS 0.30 Dsui_0824 pseudouridine synthase family protein 0.09 Dsui_2922 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase low > 51

Not shown: 34 genomes with orthologs for MCAODC_14410 only; 11 genomes with orthologs for MCAODC_13975 only