Conservation of cofitness between MCAODC_00680 and MCAODC_06160 in Escherichia coli ECRC101

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_00680 skp molecular chaperone Skp 1.0 MCAODC_06160 rfaQ lipopolysaccharide core heptosyltransferase RfaQ 0.67 13
Escherichia coli ECRC99 1.00 KEDOAH_17990 skp molecular chaperone Skp 1.00 KEDOAH_12500 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli ECRC100 1.00 OKFHMN_10165 skp molecular chaperone Skp 1.00 OKFHMN_15650 rfaQ lipopolysaccharide core heptosyltransferase RfaQ 0.74 66
Escherichia coli ECOR27 1.00 NOLOHH_02510 skp molecular chaperone Skp 1.00 NOLOHH_07530 rfaQ lipopolysaccharide core heptosyltransferase RfaQ 0.55 44
Escherichia coli ECOR38 1.00 HEPCGN_08120 skp molecular chaperone Skp 1.00 HEPCGN_14475 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli ECRC98 1.00 JDDGAC_13760 skp molecular chaperone Skp 1.00 JDDGAC_19275 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli ECRC62 1.00 BNILDI_09160 skp molecular chaperone Skp 1.00 BNILDI_03985 rfaQ lipopolysaccharide core heptosyltransferase RfaQ low > 75
Escherichia coli ECRC102 1.00 NIAGMN_08015 skp molecular chaperone Skp 1.00 NIAGMN_13410 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia fergusonii Becca 1.00 EFB2_03866 Chaperone protein Skp 0.99 EFB2_00181 Lipopolysaccharide core heptosyltransferase RfaQ low > 86
Escherichia coli BL21 1.00 ECD_00176 periplasmic chaperone 1.00 ECD_03489 lipopolysaccharide core biosynthesis protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03485 Chaperone protein Skp 1.00 OHPLBJKB_00070 Lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli BW25113 1.00 b0178 hlpA periplasmic chaperone (NCBI) 0.71 b3632 rfaQ lipopolysaccharide core biosynthesis protein (NCBI) 0.54 5
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00970 molecular chaperone Skp 0.99 ECOLIN_RS20700 lipopolysaccharide core heptosyltransferase RfaQ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF44 Outer membrane protein H precursor 0.67 GFF379 Lipopolysaccharide heptosyltransferase III (EC 2.4.1.-) — —
Klebsiella michiganensis M5al 0.91 BWI76_RS05260 chaperone 0.39 BWI76_RS27295 putative lipopolysaccharide heptosyltransferase III — —
Enterobacter sp. TBS_079 0.85 MPMX20_00862 Chaperone protein Skp 0.41 MPMX20_00107 Lipopolysaccharide core heptosyltransferase RfaQ — —
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3766 Outer membrane protein 0.40 EX28DRAFT_3878 lipopolysaccharide heptosyltransferase III, putative — —
Dickeya dadantii 3937 0.62 DDA3937_RS05160 molecular chaperone Skp 0.27 DDA3937_RS20455 putative lipopolysaccharide heptosyltransferase III low > 74
Dickeya dianthicola ME23 0.62 DZA65_RS05500 molecular chaperone Skp 0.26 DZA65_RS00810 putative lipopolysaccharide heptosyltransferase III 0.54 13
Dickeya dianthicola 67-19 0.62 HGI48_RS05160 molecular chaperone Skp 0.27 HGI48_RS00755 putative lipopolysaccharide heptosyltransferase III — —
Pantoea sp. MT58 0.62 IAI47_15485 molecular chaperone Skp 0.40 IAI47_00660 putative lipopolysaccharide heptosyltransferase III low > 76
Rahnella sp. WP5 0.60 EX31_RS12990 molecular chaperone Skp 0.42 EX31_RS14430 putative lipopolysaccharide heptosyltransferase III — —
Serratia liquefaciens MT49 0.57 IAI46_20215 molecular chaperone Skp 0.43 IAI46_24775 putative lipopolysaccharide heptosyltransferase III low > 86
Erwinia tracheiphila SCR3 0.54 LU632_RS19920 skp molecular chaperone Skp 0.39 LU632_RS21950 rfaQ putative lipopolysaccharide heptosyltransferase III — —
Pectobacterium carotovorum WPP14 0.53 HER17_RS16290 molecular chaperone Skp 0.31 HER17_RS20785 putative lipopolysaccharide heptosyltransferase III low > 75
Shewanella sp. ANA-3 0.25 Shewana3_2806 outer membrane chaperone Skp (OmpH) (RefSeq) 0.13 Shewana3_4100 glycosyl transferase family protein (RefSeq) — —
Shewanella oneidensis MR-1 0.25 SO1638 ompH outer membrane protein OmpH (NCBI ptt file) 0.12 SO4678 heptosyl transferase, glycosyltransferase family 9 protein (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.25 Sama_1148 outer membrane protein OmpH (RefSeq) 0.12 Sama_0102 glycosyl transferase family protein (RefSeq) — —
Shewanella loihica PV-4 0.24 Shew_2626 outer membrane chaperone Skp (OmpH) (RefSeq) 0.12 Shew_3702 glycosyl transferase family protein (RefSeq) — —

Not shown: 4 genomes with orthologs for MCAODC_00680 only; 19 genomes with orthologs for MCAODC_06160 only