Conservation of cofitness between JDDGAC_25060 and JDDGAC_11965 in Escherichia coli ECRC98

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.0 JDDGAC_11965 ppiD peptidylprolyl isomerase 0.96 13
Escherichia coli ECRC100 1.00 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_08310 ppiD peptidylprolyl isomerase low > 80
Escherichia coli ECRC99 1.00 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_19655 ppiD peptidylprolyl isomerase — —
Escherichia coli ECRC102 1.00 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_06365 ppiD peptidylprolyl isomerase — —
Escherichia coli ECRC101 1.00 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_27535 ppiD peptidylprolyl isomerase low > 87
Escherichia coli BL21 1.00 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_00393 periplasmic folding chaperone, has an inactive PPIase domain low > 61
Escherichia coli ECRC62 1.00 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.00 BNILDI_22660 ppiD peptidylprolyl isomerase low > 75
Escherichia coli BW25113 1.00 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b0441 ppiD peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_13070 rseC SoxR-reducing system protein RseC 0.99 NOLOHH_01245 ppiD peptidylprolyl isomerase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_03232 Peptidyl-prolyl cis-trans isomerase D low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 1.00 ECOLIN_RS02645 peptidylprolyl isomerase low > 55
Escherichia fergusonii Becca 0.99 EFB2_01326 Protein RseC 1.00 EFB2_03616 Peptidyl-prolyl cis-trans isomerase D low > 86
Escherichia coli ECOR38 0.99 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.00 HEPCGN_06925 ppiD peptidylprolyl isomerase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.87 GFF4357 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS21340 SoxR reducing system protein RseC 0.80 BWI76_RS06545 peptidylprolyl isomerase low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.84 MPMX20_01032 Peptidyl-prolyl cis-trans isomerase D low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.85 EX28DRAFT_2529 Parvulin-like peptidyl-prolyl isomerase low > 76
Pantoea sp. MT58 0.63 IAI47_04865 SoxR-reducing system protein RseC 0.68 IAI47_14635 peptidylprolyl isomerase low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.53 EX31_RS22265 peptidylprolyl isomerase low > 89
Serratia liquefaciens MT49 0.53 IAI46_19570 SoxR-reducing system protein RseC 0.56 IAI46_05030 peptidylprolyl isomerase low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.68 LU632_RS18325 ppiD peptidylprolyl isomerase — —
Pectobacterium carotovorum WPP14 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.57 HER17_RS15830 peptidylprolyl isomerase low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.58 DDA3937_RS05660 peptidylprolyl isomerase low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.57 HGI48_RS05705 peptidylprolyl isomerase — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.57 DZA65_RS06030 peptidylprolyl isomerase — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.28 SO1798 ppiD peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) — —
Shewanella loihica PV-4 0.20 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.27 Shew_2504 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) — —
Marinobacter adhaerens HP15 0.20 HP15_778 positive regulator of sigma E, RseC/MucC 0.17 HP15_2181 PpiC-type peptidyl-prolyl cis-trans isomerase — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.19 Psest_2283 Parvulin-like peptidyl-prolyl isomerase — —
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.16 B158DRAFT_1042 Parvulin-like peptidyl-prolyl isomerase low > 40
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.23 MIT1002_02755 Peptidyl-prolyl cis-trans isomerase D low > 70
Magnetospirillum magneticum AMB-1 0.16 AMB_RS13145 positive regulator of sigma E activity 0.12 AMB_RS09180 peptidylprolyl isomerase — —

Not shown: 0 genomes with orthologs for JDDGAC_25060 only; 51 genomes with orthologs for JDDGAC_11965 only