Conservation of cofitness between JDDGAC_25060 and JDDGAC_02130 in Escherichia coli ECRC98

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.0 JDDGAC_02130 rsxD electron transport complex subunit RsxD 0.96 16
Escherichia coli BL21 1.00 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_01600 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex
Escherichia coli ECRC99 1.00 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_00565 rsxD electron transport complex subunit RsxD
Escherichia coli ECRC62 1.00 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.00 BNILDI_16850 rsxD electron transport complex subunit RsxD low > 75
Escherichia coli ECRC101 1.00 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_17870 rsxD electron transport complex subunit RsxD 0.78 4
Escherichia coli ECRC100 1.00 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_27540 rsxD electron transport complex subunit RsxD 0.83 20
Escherichia coli ECRC102 1.00 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_00525 rsxD electron transport complex subunit RsxD
Escherichia coli ECOR27 1.00 NOLOHH_13070 rseC SoxR-reducing system protein RseC 1.00 NOLOHH_18060 rsxD electron transport complex subunit RsxD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_02096 Electron transport complex subunit RsxD low > 73
Escherichia coli BW25113 1.00 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b1630 rsxD electron transport complex protein RnfD (NCBI) 0.67 4
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 1.00 ECOLIN_RS09095 electron transport complex subunit RsxD
Escherichia fergusonii Becca 0.99 EFB2_01326 Protein RseC 0.99 EFB2_02362 Ion-translocating oxidoreductase complex subunit D low > 86
Escherichia coli ECOR38 0.99 HEPCGN_20540 rseC SoxR-reducing system protein RseC 0.99 HEPCGN_05925 rsxD electron transport complex subunit RsxD 0.91 9
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.87 GFF3644 Electron transport complex protein RnfD 0.75 19
Klebsiella michiganensis M5al 0.77 BWI76_RS21340 SoxR reducing system protein RseC 0.88 BWI76_RS16370 electron transport complex subunit D 0.35 4
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.85 MPMX20_02008 Ion-translocating oxidoreductase complex subunit D 0.46 3
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.85 EX28DRAFT_1626 electron transport complex, RnfABCDGE type, D subunit low > 76
Pantoea sp. MT58 0.63 IAI47_04865 SoxR-reducing system protein RseC 0.77 IAI47_10460 electron transport complex subunit RsxD
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.69 EX31_RS06605 electron transport complex subunit RsxD low > 89
Serratia liquefaciens MT49 0.53 IAI46_19570 SoxR-reducing system protein RseC 0.68 IAI46_11470 electron transport complex subunit RsxD low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.76 LU632_RS11320 rsxD electron transport complex subunit RsxD
Pectobacterium carotovorum WPP14 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.71 HER17_RS10845 electron transport complex subunit RsxD 0.85 17
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.68 DDA3937_RS10560 electron transport complex subunit RsxD 0.35 47
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.67 HGI48_RS10560 electron transport complex subunit RsxD
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.68 DZA65_RS11040 electron transport complex subunit RsxD
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.59 SO2511 membrane protein, putative (NCBI ptt file)
Shewanella loihica PV-4 0.20 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.53 Shew_2069 electron transport complex, RnfABCDGE type, D subunit (RefSeq)
Marinobacter adhaerens HP15 0.20 HP15_778 positive regulator of sigma E, RseC/MucC 0.42 HP15_1288 electron transport complex, RnfABCDGE type, D subunit
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.44 Psest_3115 electron transport complex, RnfABCDGE type, D subunit
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.49 B158DRAFT_2368 electron transport complex, RnfABCDGE type, D subunit
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.50 MIT1002_01254 Nitrogen fixation protein RnfD
Magnetospirillum magneticum AMB-1 0.16 AMB_RS13145 positive regulator of sigma E activity 0.33 AMB_RS13165 electron transporter RnfD 0.70 52

Not shown: 0 genomes with orthologs for JDDGAC_25060 only; 20 genomes with orthologs for JDDGAC_02130 only