Conservation of cofitness between JDDGAC_25060 and JDDGAC_01040 in Escherichia coli ECRC98

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.0 JDDGAC_01040 prc carboxy terminal-processing peptidase 0.95 17
Escherichia coli ECRC100 1.00 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_26465 prc carboxy terminal-processing peptidase low > 80
Escherichia coli ECRC102 1.00 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_01595 prc carboxy terminal-processing peptidase — —
Escherichia coli BL21 1.00 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_01801 carboxy-terminal protease for penicillin-binding protein 3 low > 61
Escherichia coli ECRC99 1.00 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_01640 prc carboxy terminal-processing peptidase — —
Escherichia coli ECRC101 1.00 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_18940 prc carboxy terminal-processing peptidase low > 87
Escherichia coli ECRC62 1.00 BNILDI_11870 rseC SoxR-reducing system protein RseC 0.99 BNILDI_15770 prc carboxy terminal-processing peptidase low > 75
Escherichia coli BW25113 1.00 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b1830 prc carboxy-terminal protease for penicillin-binding protein 3 (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_13070 rseC SoxR-reducing system protein RseC 1.00 NOLOHH_16975 prc carboxy terminal-processing peptidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_01901 Tail-specific protease low > 73
Escherichia fergusonii Becca 0.99 EFB2_01326 Protein RseC 1.00 EFB2_02171 Tail-specific protease low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 1.00 ECOLIN_RS10190 carboxy terminal-processing peptidase — —
Escherichia coli ECOR38 0.99 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.00 HEPCGN_04865 prc carboxy terminal-processing peptidase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.92 GFF2845 Tail-specific protease precursor (EC 3.4.21.102) low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS21340 SoxR reducing system protein RseC 0.90 BWI76_RS17975 tail-specific protease low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.91 MPMX20_02737 Tail-specific protease low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.91 EX28DRAFT_0726 C-terminal peptidase (prc) low > 76
Pantoea sp. MT58 0.63 IAI47_04865 SoxR-reducing system protein RseC 0.83 IAI47_08705 carboxy terminal-processing peptidase low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.77 EX31_RS24880 carboxy terminal-processing peptidase low > 89
Serratia liquefaciens MT49 0.53 IAI46_19570 SoxR-reducing system protein RseC 0.83 IAI46_10800 carboxy terminal-processing peptidase low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.82 LU632_RS13250 prc carboxy terminal-processing peptidase — —
Pectobacterium carotovorum WPP14 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.80 HER17_RS11690 carboxy terminal-processing peptidase low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.80 DDA3937_RS11965 carboxy terminal-processing peptidase low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.79 HGI48_RS12055 carboxy terminal-processing peptidase — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.79 DZA65_RS12505 carboxy terminal-processing peptidase — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.49 SO2601 carboxyl-terminal protease (NCBI ptt file) — —
Shewanella loihica PV-4 0.20 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.51 Shew_1802 carboxy-terminal protease (RefSeq) — —
Marinobacter adhaerens HP15 0.20 HP15_778 positive regulator of sigma E, RseC/MucC 0.34 HP15_1231 periplasmic tail-specific proteinase — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.35 Psest_2951 C-terminal peptidase (prc) — —
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.36 B158DRAFT_1732 C-terminal peptidase (prc) low > 40
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.48 MIT1002_02025 Tail-specific protease precursor low > 70

Not shown: 1 genomes with orthologs for JDDGAC_25060 only; 26 genomes with orthologs for JDDGAC_01040 only