Conservation of cofitness between JDDGAC_25115 and JDDGAC_00955 in Escherichia coli ECRC98

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25115 yfhH MurR/RpiR family transcriptional regulator 1.0 JDDGAC_00955 ptrB oligopeptidase B 0.61 13
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01146 HTH-type transcriptional regulator MurR 0.99 OHPLBJKB_01886 Protease 2 low > 73
Escherichia coli ECRC102 1.00 NIAGMN_19220 yfhH MurR/RpiR family transcriptional regulator 1.00 NIAGMN_01680 ptrB oligopeptidase B — —
Escherichia coli ECOR27 1.00 NOLOHH_13125 yfhH MurR/RpiR family transcriptional regulator 0.99 NOLOHH_16890 ptrB oligopeptidase B low > 75
Escherichia coli ECRC100 1.00 OKFHMN_21450 yfhH MurR/RpiR family transcriptional regulator 1.00 OKFHMN_26380 ptrB oligopeptidase B low > 80
Escherichia coli ECRC62 1.00 BNILDI_11925 yfhH MurR/RpiR family transcriptional regulator 0.99 BNILDI_15685 ptrB oligopeptidase B low > 75
Escherichia coli BL21 1.00 ECD_02455 putative DNA-binding transcriptional regulator 0.99 ECD_01816 protease II low > 61
Escherichia coli BW25113 1.00 b2561 yfhH orf, hypothetical protein (VIMSS) 0.99 b1845 ptrB protease II (NCBI) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_06770 yfhH MurR/RpiR family transcriptional regulator 1.00 KEDOAH_01725 ptrB oligopeptidase B — —
Escherichia coli ECRC101 1.00 MCAODC_11980 yfhH MurR/RpiR family transcriptional regulator 1.00 MCAODC_19025 ptrB oligopeptidase B low > 87
Escherichia coli ECOR38 1.00 HEPCGN_20595 yfhH MurR/RpiR family transcriptional regulator 0.99 HEPCGN_04780 ptrB oligopeptidase B low > 87
Escherichia fergusonii Becca 1.00 EFB2_01335 HTH-type transcriptional regulator MurR 0.99 EFB2_02099 Protease 2 low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF2466 Sialic acid utilization regulator, RpiR family 0.90 GFF1624 Protease II (EC 3.4.21.83) low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0085 transcriptional regulator, RpiR family 0.83 EX28DRAFT_0709 Protease II low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03432 HTH-type transcriptional regulator MurR 0.84 MPMX20_02752 Protease 2 low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS21290 DNA-binding transcriptional regulator 0.83 BWI76_RS18075 oligopeptidase B low > 92
Pantoea sp. MT58 0.66 IAI47_04910 MurR/RpiR family transcriptional regulator 0.73 IAI47_08515 prolyl oligopeptidase family serine peptidase low > 76
Serratia liquefaciens MT49 0.63 IAI46_19515 MurR/RpiR family transcriptional regulator 0.65 IAI46_09975 prolyl oligopeptidase family serine peptidase low > 86
Rahnella sp. WP5 0.61 EX31_RS21865 MurR/RpiR family transcriptional regulator 0.64 EX31_RS24750 prolyl oligopeptidase family serine peptidase low > 89
Lysobacter sp. OAE881 0.21 ABIE51_RS13700 MurR/RpiR family transcriptional regulator 0.43 ABIE51_RS03010 S9 family peptidase low > 62
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_12345 rpiR transcriptional regulator 0.11 OKGIIK_14405 Peptidase S9 low > 52
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS12100 MurR/RpiR family transcriptional regulator 0.12 ABZR86_RS17900 prolyl oligopeptidase family serine peptidase low > 74
Rhodanobacter denitrificans MT42 0.18 LRK55_RS11245 MurR/RpiR family transcriptional regulator 0.10 LRK55_RS07655 prolyl oligopeptidase family serine peptidase low > 63
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS11515 MurR/RpiR family transcriptional regulator 0.10 LRK54_RS07925 prolyl oligopeptidase family serine peptidase low > 59
Caulobacter crescentus NA1000 0.10 CCNA_01355 transcriptional regulator IolR 0.31 CCNA_00985 protease II PtrB low > 66
Caulobacter crescentus NA1000 Δfur 0.10 CCNA_01355 transcriptional regulator IolR 0.31 CCNA_00985 protease II PtrB low > 67

Not shown: 2 genomes with orthologs for JDDGAC_25115 only; 37 genomes with orthologs for JDDGAC_00955 only