Conservation of cofitness between IAI47_10250 and IAI47_19710 in Pantoea sp. MT58

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_10250 TonB-dependent receptor 1.0 IAI47_19710 helix-turn-helix transcriptional regulator 0.59 15
Enterobacter sp. TBS_079 0.71 MPMX20_02408 Fe(3+) dicitrate transport protein FecA 0.62 MPMX20_03547 putative HTH-type transcriptional regulator YgaV low > 85
Serratia liquefaciens MT49 0.70 IAI46_15720 TonB-dependent receptor 0.26 IAI46_09640 winged helix-turn-helix transcriptional regulator low > 86
Klebsiella michiganensis M5al 0.70 BWI76_RS13500 TonB-dependent receptor 0.58 BWI76_RS21995 transcriptional regulator low > 92
Enterobacter asburiae PDN3 0.70 EX28DRAFT_1043 TonB-dependent siderophore receptor 0.61 EX28DRAFT_2752 Predicted transcriptional regulators low > 76
Escherichia fergusonii Becca 0.69 EFB2_02535 Metal-pseudopaline receptor CntO 0.56 EFB2_01263 putative HTH-type transcriptional regulator YgaV low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_02262 Vitamin B12 transporter BtuB 0.55 OHPLBJKB_01065 putative HTH-type transcriptional regulator YgaV low > 73
Escherichia coli BL21 0.69 ECD_01408 putative iron outer membrane transporter 0.55 ECD_02523 tributyltin-inducible repressor of ygaVP low > 61
Escherichia coli BW25113 0.69 b1451 yncD predicted iron outer membrane transporter (NCBI) 0.55 b2667 ygaV predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC62 0.69 BNILDI_17625 yncD putative TonB-dependent receptor YncD 0.55 BNILDI_11270 ygaV putative HTH-type transcriptional regulator YgaV low > 75
Escherichia coli ECOR27 0.69 NOLOHH_19190 yncD putative TonB-dependent receptor YncD 0.55 NOLOHH_12710 ygaV putative HTH-type transcriptional regulator YgaV low > 75
Escherichia coli ECRC101 0.68 MCAODC_16420 yncD putative TonB-dependent receptor YncD 0.55 MCAODC_11405 ygaV putative HTH-type transcriptional regulator YgaV low > 87
Escherichia coli ECOR38 0.68 HEPCGN_26290 yncD putative TonB-dependent receptor YncD 0.55 HEPCGN_20180 ygaV putative HTH-type transcriptional regulator YgaV low > 87
Escherichia coli ECRC102 0.68 NIAGMN_25655 yncD putative TonB-dependent receptor YncD 0.55 NIAGMN_18650 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli ECRC99 0.68 KEDOAH_26920 yncD putative TonB-dependent receptor YncD 0.55 KEDOAH_07255 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli ECRC100 0.68 OKFHMN_01520 yncD putative TonB-dependent receptor YncD 0.55 OKFHMN_20885 ygaV putative HTH-type transcriptional regulator YgaV low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF2578 Probable tonB-dependent receptor yncD precursor 0.59 GFF1572 Transcriptional regulator, ArsR family low > 78
Escherichia coli ECRC98 0.68 JDDGAC_04010 yncD putative TonB-dependent receptor YncD 0.55 JDDGAC_24545 ygaV putative HTH-type transcriptional regulator YgaV low > 86
Rahnella sp. WP5 0.64 EX31_RS00270 TonB-dependent receptor 0.69 EX31_RS21725 helix-turn-helix transcriptional regulator 0.55 67
Variovorax sp. SCN45 0.48 GFF5299 TonB-dependent receptor 0.25 GFF6927 Transcriptional regulator, ArsR family low > 127
Acinetobacter radioresistens SK82 0.42 MPMX26_01713 Metal-pseudopaline receptor CntO 0.28 MPMX26_01494 Biofilm growth-associated repressor low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF657 Probable tonB-dependent receptor yncD precursor 0.42 GFF3245 Transcriptional regulator, ArsR family low > 90
Pseudomonas simiae WCS417 0.33 PS417_02265 TonB-dependent receptor 0.29 PS417_17530 ArsR family transcriptional regulator low > 88
Rhodopseudomonas palustris CGA009 0.11 TX73_009340 TonB-dependent receptor 0.34 TX73_005240 metalloregulator ArsR/SmtB family transcription factor low > 86
Sphingomonas koreensis DSMZ 15582 0.08 Ga0059261_3336 Outer membrane receptor proteins, mostly Fe transport 0.35 Ga0059261_0944 Predicted transcriptional regulators — —
Pseudomonas fluorescens GW456-L13 0.07 PfGW456L13_3689 TonB-dependent receptor 0.29 PfGW456L13_3537 Transcriptional regulator, ArsR family low > 87
Rhodospirillum rubrum S1H 0.06 Rru_A0865 TonB-dependent receptor (NCBI) 0.35 Rru_A2615 Transcriptional Regulator, ArsR family (NCBI) low > 58
Pseudomonas fluorescens FW300-N1B4 0.06 Pf1N1B4_116 Iron(III) dicitrate transport protein FecA @ Iron siderophore receptor protein 0.29 Pf1N1B4_4483 Transcriptional regulator, ArsR family low > 87
Agrobacterium fabrum C58 0.05 Atu4400 ferrienterobactin-like protein 0.34 Atu2278 transcriptional regulator, ArsR family low > 89
Dinoroseobacter shibae DFL-12 0.05 Dshi_1449 TonB-dependent receptor (RefSeq) 0.23 Dshi_2812 transcriptional regulator, ArsR family (RefSeq) low > 64
Pectobacterium carotovorum WPP14 0.05 HER17_RS13355 TonB-dependent receptor 0.42 HER17_RS03345 metalloregulator ArsR/SmtB family transcription factor low > 75

Not shown: 21 genomes with orthologs for IAI47_10250 only; 19 genomes with orthologs for IAI47_19710 only