Conservation of cofitness between IAI47_14515 and IAI47_09265 in Pantoea sp. MT58

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_14515 multidrug efflux RND transporter permease subunit 1.0 IAI47_09265 LapA family protein 0.53 9
Erwinia tracheiphila SCR3 0.87 LU632_RS18185 efflux RND transporter permease subunit 0.57 LU632_RS12520 lipopolysaccharide assembly protein LapA domain-containing protein — —
Rahnella sp. WP5 0.82 EX31_RS22470 multidrug efflux RND transporter permease subunit 0.58 EX31_RS09870 LapA family protein low > 89
Enterobacter asburiae PDN3 0.82 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.67 EX28DRAFT_0952 Predicted membrane protein low > 76
Klebsiella michiganensis M5al 0.82 BWI76_RS06775 multidrug efflux RND transporter permease subunit 0.70 BWI76_RS11955 hypothetical protein — —
Enterobacter sp. TBS_079 0.81 MPMX20_01064 Multidrug efflux pump subunit AcrB 0.67 MPMX20_02496 Lipopolysaccharide assembly protein A low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF4379 RND efflux system, inner membrane transporter CmeB 0.67 GFF2706 Inner membrane protein yciS low > 78
Escherichia coli ECOR38 0.80 HEPCGN_06820 acrB efflux RND transporter permease AcrB 0.72 HEPCGN_25640 lapA lipopolysaccharide assembly protein LapA low > 85
Escherichia coli BW25113 0.80 b0462 acrB multidrug efflux system protein (NCBI) 0.73 b1279 yciS conserved inner membrane protein (NCBI) low > 76
Escherichia coli ECRC62 0.80 BNILDI_22555 acrB efflux RND transporter permease AcrB 0.72 BNILDI_18375 lapA lipopolysaccharide assembly protein LapA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_03212 Multidrug efflux pump subunit AcrB 0.73 OHPLBJKB_02403 Lipopolysaccharide assembly protein A low > 73
Escherichia coli Nissle 1917 0.80 ECOLIN_RS02750 efflux RND transporter permease AcrB 0.73 ECOLIN_RS07720 lipopolysaccharide assembly protein LapA — —
Escherichia coli BL21 0.80 ECD_00413 multidrug efflux system protein 0.73 ECD_01256 DUF1049 family inner membrane protein, function unknown — —
Escherichia coli ECOR27 0.80 NOLOHH_01140 acrB efflux RND transporter permease AcrB 0.72 NOLOHH_20225 lapA lipopolysaccharide assembly protein LapA — —
Escherichia fergusonii Becca 0.80 EFB2_03596 Multidrug efflux pump subunit AcrB 0.73 EFB2_02646 Lipopolysaccharide assembly protein A low > 86
Escherichia coli ECRC101 0.80 OKFHMN_08205 acrB efflux RND transporter permease AcrB 0.69 OKFHMN_02560 lapA lipopolysaccharide assembly protein LapA — —
Escherichia coli ECRC102 0.80 NIAGMN_06260 acrB efflux RND transporter permease AcrB 0.69 NIAGMN_26730 lapA lipopolysaccharide assembly protein LapA — —
Escherichia coli ECRC99 0.80 KEDOAH_19760 acrB efflux RND transporter permease AcrB 0.69 KEDOAH_26205 lapA lipopolysaccharide assembly protein LapA — —
Escherichia coli ECRC101 0.80 MCAODC_27430 acrB efflux RND transporter permease AcrB 0.69 MCAODC_15705 lapA lipopolysaccharide assembly protein LapA — —
Dickeya dadantii 3937 0.79 DDA3937_RS05735 multidrug efflux RND transporter permease subunit 0.65 DDA3937_RS12535 LapA family protein low > 74
Serratia liquefaciens MT49 0.78 IAI46_05185 multidrug efflux RND transporter permease subunit SdeY 0.63 IAI46_13935 LapA family protein low > 86
Dickeya dianthicola ME23 0.77 DZA65_RS06115 multidrug efflux RND transporter permease subunit 0.65 DZA65_RS13040 LapA family protein low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS05790 multidrug efflux RND transporter permease subunit 0.65 HGI48_RS12590 LapA family protein low > 71
Pectobacterium carotovorum WPP14 0.77 HER17_RS15740 multidrug efflux RND transporter permease subunit 0.69 HER17_RS09380 LapA family protein low > 75
Escherichia coli ECRC98 0.69 JDDGAC_19905 mdtF multidrug efflux pump RND permease MdtF 0.69 JDDGAC_05105 lapA lipopolysaccharide assembly protein LapA — —
Shewanella oneidensis MR-1 0.66 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) 0.32 SO2400 conserved hypothetical protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.66 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.32 Shewana3_1979 hypothetical protein (RefSeq) — —
Shewanella amazonensis SB2B 0.66 Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) 0.33 Sama_1738 membrane protein (RefSeq) — —
Shewanella loihica PV-4 0.65 Shew_0032 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.29 Shew_1956 hypothetical protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.57 MIT1002_00135 Multidrug-efflux transporter MexB 0.29 MIT1002_02186 Inner membrane protein YciS — —

Not shown: 54 genomes with orthologs for IAI47_14515 only; 0 genomes with orthologs for IAI47_09265 only