Conservation of cofitness between IAI47_11310 and IAI47_09210 in Pantoea sp. MT58

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_11310 redox-regulated ATPase YchF 1.0 IAI47_09210 23S rRNA pseudouridine(2605) synthase RluB 0.60 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2784 GTP-binding and nucleic acid-binding protein YchF 0.83 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) low > 78
Dickeya dianthicola 67-19 0.94 HGI48_RS10975 redox-regulated ATPase YchF 0.80 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB low > 71
Dickeya dianthicola ME23 0.94 DZA65_RS11435 redox-regulated ATPase YchF 0.80 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB low > 75
Dickeya dadantii 3937 0.94 DDA3937_RS11035 redox-regulated ATPase YchF 0.80 DDA3937_RS10500 23S rRNA pseudouridine(2605) synthase RluB 0.59 8
Erwinia tracheiphila SCR3 0.94 LU632_RS13950 ychF redox-regulated ATPase YchF 0.84 LU632_RS12730 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 74
Escherichia coli ECOR27 0.93 NOLOHH_20650 ychF redox-regulated ATPase YchF 0.83 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_02484 Ribosome-binding ATPase YchF 0.83 OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B low > 73
Escherichia coli ECOR38 0.93 HEPCGN_24875 ychF redox-regulated ATPase YchF 0.83 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli BW25113 0.93 b1203 ychF translation-associated GTPase (NCBI) 0.83 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) — —
Escherichia coli ECRC101 0.93 OKFHMN_28410 ychF redox-regulated ATPase YchF 0.83 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC99 0.93 KEDOAH_25405 ychF redox-regulated ATPase YchF 0.83 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC101 0.93 MCAODC_21850 ychF redox-regulated ATPase YchF 0.83 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC98 0.93 JDDGAC_06165 ychF redox-regulated ATPase YchF 0.83 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC102 0.93 NIAGMN_27825 ychF redox-regulated ATPase YchF 0.83 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli Nissle 1917 0.93 ECOLIN_RS07280 redox-regulated ATPase YchF 0.83 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia fergusonii Becca 0.93 EFB2_02724 Ribosome-binding ATPase YchF 0.83 EFB2_02658 Ribosomal large subunit pseudouridine synthase B low > 86
Escherichia coli BL21 0.93 ECD_01178 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated 0.83 ECD_01245 23S rRNA pseudouridine(2605) synthase — —
Escherichia coli ECRC62 0.93 BNILDI_18805 ychF redox-regulated ATPase YchF 0.83 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Pectobacterium carotovorum WPP14 0.93 HER17_RS10445 redox-regulated ATPase YchF 0.81 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB low > 75
Serratia liquefaciens MT49 0.91 IAI46_10240 redox-regulated ATPase YchF 0.83 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB — —
Enterobacter sp. TBS_079 0.89 MPMX20_02645 Ribosome-binding ATPase YchF 0.83 MPMX20_02507 Ribosomal large subunit pseudouridine synthase B low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0821 GTP-binding protein YchF 0.82 EX28DRAFT_0940 pseudouridine synthase — —
Klebsiella michiganensis M5al 0.89 BWI76_RS17485 GTP-binding protein YchF 0.83 BWI76_RS11880 23S rRNA pseudouridylate synthase B — —
Shewanella amazonensis SB2B 0.81 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.62 Sama_2124 pseudouridine synthase, Rsu (RefSeq) 0.62 11
Alteromonas macleodii MIT1002 0.81 MIT1002_01504 Ribosome-binding ATPase YchF 0.54 MIT1002_01435 Ribosomal large subunit pseudouridine synthase B low > 70
Shewanella sp. ANA-3 0.80 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.63 Shewana3_1525 ribosomal large subunit pseudouridine synthase B (RefSeq) 0.76 1
Shewanella loihica PV-4 0.78 Shew_2919 translation-associated GTPase (RefSeq) 0.64 Shew_2246 pseudouridine synthase (RefSeq) 0.64 6
Marinobacter adhaerens HP15 0.75 HP15_704 translation-associated GTPase 0.48 HP15_1530 RNA-binding S4 domain protein 0.35 7
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_10875 redox-regulated ATPase YchF 0.65 CSW01_05970 23S rRNA pseudouridylate synthase B — —
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_2052 GTP-binding protein YchF 0.47 B158DRAFT_2311 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) low > 40
Acinetobacter radioresistens SK82 0.72 MPMX26_01861 Ribosome-binding ATPase YchF 0.48 MPMX26_02450 Ribosomal large subunit pseudouridine synthase B low > 36
Fusobacterium nucleatum SB010 0.58 HUW76_08540 redox-regulated ATPase YchF 0.23 HUW76_04625 rRNA pseudouridine synthase low > 35

Not shown: 68 genomes with orthologs for IAI47_11310 only; 0 genomes with orthologs for IAI47_09210 only