Conservation of cofitness between HSERO_RS09135 and HSERO_RS12550 in Herbaspirillum seropedicae SmR1

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS09135 ABC transporter 1.0 HSERO_RS12550 D-lactate dehydrogenase 0.41 12
Ralstonia sp. UNC404CL21Col 0.75 ABZR87_RS19895 ribosome-associated ATPase/putative transporter RbbA 0.51 ABZR87_RS03505 2-hydroxyacid dehydrogenase low > 80
Escherichia coli ECRC62 0.68 BNILDI_03150 rbbA ribosome-associated ATPase/putative transporter RbbA 0.47 BNILDI_17985 ldhA D-lactate dehydrogenase low > 75
Escherichia coli BW25113 0.68 b3486 rbbA fused ribosome-associated ATPase: ATP-binding protein/ATP-binding protein/predicted membrane protein (NCBI) 0.47 b1380 ldhA D-lactate dehydrogenase (NCBI) low > 76
Escherichia coli BL21 0.68 ECD_03336 ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein 0.47 ECD_01352 fermentative D-lactate dehydrogenase, NAD-dependent low > 61
Escherichia coli ECOR27 0.68 NOLOHH_08405 rbbA ribosome-associated ATPase/putative transporter RbbA 0.47 NOLOHH_19530 ldhA D-lactate dehydrogenase low > 75
Escherichia coli ECOR38 0.68 HEPCGN_15390 rbbA ribosome-associated ATPase/putative transporter RbbA 0.47 HEPCGN_26050 ldhA D-lactate dehydrogenase low > 87
Escherichia coli Nissle 1917 0.68 ECOLIN_RS19940 ribosome-associated ATPase/putative transporter RbbA 0.47 ECOLIN_RS08110 D-lactate dehydrogenase low > 55
Escherichia coli ECRC101 0.68 MCAODC_06990 rbbA ribosome-associated ATPase/putative transporter RbbA 0.47 MCAODC_16140 ldhA D-lactate dehydrogenase low > 87
Escherichia coli ECRC100 0.68 OKFHMN_16470 rbbA ribosome-associated ATPase/putative transporter RbbA 0.47 OKFHMN_01795 ldhA D-lactate dehydrogenase low > 80
Escherichia coli ECRC98 0.68 JDDGAC_20100 rbbA ribosome-associated ATPase/putative transporter RbbA 0.47 JDDGAC_04285 ldhA D-lactate dehydrogenase low > 86
Escherichia coli ECRC102 0.68 NIAGMN_14240 rbbA ribosome-associated ATPase/putative transporter RbbA 0.47 NIAGMN_25930 ldhA D-lactate dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00215 Ribosome-associated ATPase 0.47 OHPLBJKB_02331 D-lactate dehydrogenase low > 73
Escherichia coli ECRC99 0.68 KEDOAH_11670 rbbA ribosome-associated ATPase/putative transporter RbbA 0.47 KEDOAH_26640 ldhA D-lactate dehydrogenase — —
Escherichia fergusonii Becca 0.68 EFB2_00326 Ribosome-associated ATPase 0.47 EFB2_02576 D-lactate dehydrogenase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF526 ABC-type multidrug transport system, permease component 0.47 GFF2638 D-lactate dehydrogenase (EC 1.1.1.28) low > 78
Klebsiella michiganensis M5al 0.67 BWI76_RS03510 multidrug ABC transporter ATP-binding protein 0.47 BWI76_RS12790 lactate dehydrogenase low > 92
Pseudomonas stutzeri RCH2 0.65 Psest_4260 ABC-type multidrug transport system, ATPase component 0.53 Psest_4064 Lactate dehydrogenase and related dehydrogenases low > 67
Agrobacterium fabrum C58 0.65 Atu4667 ABC transporter permease 0.55 Atu3870 D-lactate dehydrogenase low > 89
Alteromonas macleodii MIT1002 0.60 MIT1002_00920 putative ABC transporter ATP-binding protein YbhF 0.45 MIT1002_01974 D-lactate dehydrogenase low > 70
Pseudomonas simiae WCS417 0.51 PS417_27325 multidrug ABC transporter ATP-binding protein 0.52 PS417_16375 2-hydroxyacid dehydrogenase low > 88
Pseudomonas sp. RS175 0.51 PFR28_04329 Ribosome-associated ATPase 0.52 PFR28_03228 D-lactate dehydrogenase low > 88
Pseudomonas fluorescens SBW25 0.50 PFLU_RS28980 ribosome-associated ATPase/putative transporter RbbA 0.50 PFLU_RS18415 2-hydroxyacid dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS28980 ribosome-associated ATPase/putative transporter RbbA 0.50 PFLU_RS18415 2-hydroxyacid dehydrogenase low > 109
Pseudomonas putida KT2440 0.50 PP_5207 ribosome-associated ATPase 0.55 PP_1649 D-lactate dehydrogenase low > 96
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_08795 multidrug ABC transporter ATP-binding protein 0.53 AO353_02740 hydroxyacid dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_12975 multidrug ABC transporter ATP-binding protein 0.54 AO356_19040 hydroxyacid dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_4472 ABC-type multidrug transport system, permease component 0.54 Pf6N2E2_5719 D-lactate dehydrogenase (EC 1.1.1.28) low > 103

Not shown: 5 genomes with orthologs for HSERO_RS09135 only; 36 genomes with orthologs for HSERO_RS12550 only