Conservation of cofitness between HSERO_RS13935 and HSERO_RS04820 in Herbaspirillum seropedicae SmR1

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS13935 DNAase 1.0 HSERO_RS04820 C4-dicarboxylate ABC transporter 0.39 20
Ralstonia solanacearum PSI07 0.46 RPSI07_RS18600 TatD family deoxyribonuclease 0.86 RPSI07_RS06120 C4-dicarboxylate ABC transporter low > 81
Dickeya dadantii 3937 0.35 DDA3937_RS02460 TatD family hydrolase 0.38 DDA3937_RS00440 anion permease low > 74
Pseudomonas simiae WCS417 0.35 PS417_03955 hydrolase TatD 0.11 PS417_17410 membrane protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS04000 TatD family hydrolase 0.10 PFLU_RS19325 DASS family sodium-coupled anion symporter low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS04000 TatD family hydrolase 0.10 PFLU_RS19325 DASS family sodium-coupled anion symporter low > 109
Enterobacter asburiae PDN3 0.35 EX28DRAFT_3587 Mg-dependent DNase 0.28 EX28DRAFT_0585 anion transporter — —
Escherichia coli ECRC62 0.34 BNILDI_08020 tatD metal-dependent hydrolase 0.29 BNILDI_01050 ttdT L-tartrate/succinate antiporter low > 75
Pseudomonas stutzeri RCH2 0.34 Psest_0728 hydrolase, TatD family 0.10 Psest_4312 anion transporter low > 67
Escherichia coli Nissle 1917 0.34 ECOLIN_RS25130 metal-dependent hydrolase 0.28 ECOLIN_RS17685 L-tartrate/succinate antiporter low > 55
Escherichia coli ECOR27 0.34 NOLOHH_03580 yjjV metal-dependent hydrolase 0.28 NOLOHH_10465 ttdT L-tartrate/succinate antiporter 0.49 60
Escherichia fergusonii Becca 0.34 EFB2_04068 putative metal-dependent hydrolase YjjV 0.29 EFB2_00748 L-tartrate/succinate antiporter low > 86
Escherichia coli BW25113 0.34 b4378 yjjV predicted DNase (NCBI) 0.29 b3063 ygjE predicted tartrate:succinate antiporter (NCBI) low > 76
Escherichia coli ECOR38 0.34 HEPCGN_09265 tatD metal-dependent hydrolase 0.36 HEPCGN_05515 anion permease low > 87
Escherichia coli BL21 0.34 ECD_04254 putative DNase 0.29 ECD_02933 L-tartrate/succinate antiporte low > 61
Dickeya dianthicola 67-19 0.34 HGI48_RS02415 TatD family hydrolase 0.38 HGI48_RS20955 anion permease low > 71
Pectobacterium carotovorum WPP14 0.34 HER17_RS19045 TatD family hydrolase 0.38 HER17_RS02325 DASS family sodium-coupled anion symporter low > 75
Escherichia coli ECRC102 0.33 NIAGMN_09110 yjjV metal-dependent hydrolase 0.29 NIAGMN_16440 ttdT L-tartrate/succinate antiporter — —
Escherichia coli ECRC101 0.33 MCAODC_01775 yjjV metal-dependent hydrolase 0.29 MCAODC_09190 ttdT L-tartrate/succinate antiporter low > 87
Escherichia coli ECRC99 0.33 KEDOAH_16885 yjjV metal-dependent hydrolase 0.29 KEDOAH_09470 ttdT L-tartrate/succinate antiporter — —
Escherichia coli ECRC98 0.33 JDDGAC_14855 yjjV metal-dependent hydrolase 0.29 JDDGAC_22310 ttdT L-tartrate/succinate antiporter low > 86
Escherichia coli ECRC100 0.33 OKFHMN_11260 yjjV metal-dependent hydrolase 0.29 OKFHMN_18675 ttdT L-tartrate/succinate antiporter low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_03683 putative metal-dependent hydrolase YjjV 0.29 OHPLBJKB_00639 L-tartrate/succinate antiporter low > 73
Serratia liquefaciens MT49 0.33 IAI46_02900 TatD family hydrolase 0.49 IAI46_03335 DASS family sodium-coupled anion symporter low > 86
Enterobacter sp. TBS_079 0.33 MPMX20_00677 putative metal-dependent hydrolase YjjV 0.28 MPMX20_02965 L-tartrate/succinate antiporter low > 85
Dickeya dianthicola ME23 0.32 DZA65_RS02520 metal-dependent hydrolase 0.38 DZA65_RS21940 anion permease low > 75
Klebsiella michiganensis M5al 0.32 BWI76_RS04120 metal-dependent hydrolase 0.28 BWI76_RS16110 L-tartrate/succinate antiporter low > 92
Erwinia tracheiphila SCR3 0.31 LU632_RS02510 TatD family hydrolase 0.28 LU632_RS01210 anion permease low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1040 Putative deoxyribonuclease YjjV 0.39 GFF3126 2-oxoglutarate/malate translocator low > 78
Pantoea sp. MT58 0.31 IAI47_03395 metal-dependent hydrolase 0.25 IAI47_20430 DASS family sodium-coupled anion symporter low > 76
Marinobacter adhaerens HP15 0.28 HP15_542 TatD-related deoxyribonuclease 0.06 HP15_2124 sodium: dicarboxylate cotransporter low > 73
Rahnella sp. WP5 0.26 EX31_RS04070 deoxyribonuclease YjjV 0.28 EX31_RS01165 anion permease low > 89

Not shown: 37 genomes with orthologs for HSERO_RS13935 only; 3 genomes with orthologs for HSERO_RS04820 only