Conservation of cofitness between HSERO_RS09795 and HSERO_RS04340 in Herbaspirillum seropedicae SmR1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS09795 carbon starvation protein A 1.0 HSERO_RS04340 gamma-glutamyl ligase 0.38 3
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS05220 carbon starvation CstA family protein 0.42 ABZR87_RS03955 YbdK family carboxylate-amine ligase low > 80
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS20515 large component of pyruvate transporter (cstA-like) (from data) 0.41 RR42_RS20100 gamma-glutamyl ligase low > 128
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS32880 carbon starvation CstA family protein 0.41 QEN71_RS29475 YbdK family carboxylate-amine ligase low > 153
Ralstonia solanacearum PSI07 0.76 RPSI07_RS23840 carbon starvation protein A 0.43 RPSI07_RS08555 glutamate--cysteine ligase low > 81
Ralstonia solanacearum UW163 0.76 UW163_RS04070 carbon starvation protein A 0.42 UW163_RS04900 glutamate--cysteine ligase — —
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS09510 carbon starvation protein A 0.42 RALBFv3_RS08710 glutamate--cysteine ligase low > 76
Ralstonia solanacearum GMI1000 0.76 RS_RS00110 carbon starvation protein A 0.42 RS_RS16525 glutamate--cysteine ligase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.76 GFF3273 Carbon starvation protein A 0.40 GFF358 FIG074102: hypothetical protein low > 90
Variovorax sp. OAS795 0.75 ABID97_RS22455 carbon starvation CstA family protein 0.41 ABID97_RS04885 YbdK family carboxylate-amine ligase low > 91
Variovorax sp. SCN45 0.75 GFF1737 Carbon starvation protein A 0.41 GFF6250 Glutamate--cysteine ligase-like protein YbdK low > 127
Pseudomonas putida KT2440 0.71 PP_4641 putative transporter 0.12 PP_3253 Carboxylate-amine ligase PP_3253 low > 96
Enterobacter sp. TBS_079 0.69 MPMX20_01255 Peptide transporter CstA 0.34 MPMX20_01143 Putative glutamate--cysteine ligase 2 low > 85
Enterobacter asburiae PDN3 0.68 EX28DRAFT_2369 Carbon starvation protein, predicted membrane protein 0.35 EX28DRAFT_2417 carboxylate-amine ligase, YbdK family low > 76
Escherichia coli Nissle 1917 0.68 ECOLIN_RS03280 pyruvate/proton symporter CstA 0.36 ECOLIN_RS03175 YbdK family carboxylate-amine ligase low > 55
Escherichia coli ECOR38 0.68 HEPCGN_00730 cstA pyruvate/proton symporter CstA 0.37 HEPCGN_00635 ybdK YbdK family carboxylate-amine ligase low > 87
Escherichia coli ECRC98 0.68 JDDGAC_11195 cstA pyruvate/proton symporter CstA 0.36 JDDGAC_11300 ybdK YbdK family carboxylate-amine ligase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03108 Peptide transporter CstA 0.36 OHPLBJKB_03128 Putative glutamate--cysteine ligase 2 low > 73
Escherichia coli ECRC101 0.68 MCAODC_26765 cstA pyruvate/proton symporter CstA 0.36 MCAODC_26870 ybdK YbdK family carboxylate-amine ligase low > 87
Escherichia coli ECRC99 0.68 KEDOAH_20420 cstA pyruvate/proton symporter CstA 0.36 KEDOAH_20315 ybdK YbdK family carboxylate-amine ligase — —
Escherichia coli BW25113 0.68 b0598 cstA carbon starvation protein (NCBI) 0.37 b0581 ybdK gamma-glutamyl:cysteine ligase (NCBI) low > 76
Escherichia coli ECRC100 0.68 OKFHMN_07550 cstA pyruvate/proton symporter CstA 0.36 OKFHMN_07655 ybdK YbdK family carboxylate-amine ligase low > 80
Escherichia fergusonii Becca 0.68 EFB2_03494 Peptide transporter CstA 0.36 EFB2_03513 Putative glutamate--cysteine ligase 2 low > 86
Escherichia coli ECRC62 0.68 BNILDI_21935 cstA pyruvate/proton symporter CstA 0.36 BNILDI_22045 ybdK YbdK family carboxylate-amine ligase low > 75
Escherichia coli ECRC102 0.68 NIAGMN_05605 cstA pyruvate/proton symporter CstA 0.36 NIAGMN_05710 ybdK YbdK family carboxylate-amine ligase — —
Escherichia coli ECOR27 0.68 NOLOHH_23925 cstA pyruvate/proton symporter CstA 0.36 NOLOHH_24035 ybdK YbdK family carboxylate-amine ligase low > 75
Klebsiella michiganensis M5al 0.68 BWI76_RS07775 carbon starvation protein A 0.34 BWI76_RS07515 glutamate--cysteine ligase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF4505 Carbon starvation protein A 0.36 GFF4487 FIG00638355: hypothetical protein low > 78
Rhodospirillum rubrum S1H 0.67 Rru_A0259 Carbon starvation protein CstA (NCBI) 0.16 Rru_A2462 Enzymatic protein of unknown function (NCBI) low > 58
Escherichia coli BL21 0.62 ECD_04220 putative transporter 0.37 ECD_00542 weak gamma-glutamyl:cysteine ligase low > 61

Not shown: 36 genomes with orthologs for HSERO_RS09795 only; 4 genomes with orthologs for HSERO_RS04340 only