Conservation of cofitness between HSERO_RS17660 and HSERO_RS03725 in Herbaspirillum seropedicae SmR1

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS17660 flagellar hook protein FlgE 1.0 HSERO_RS03725 type VI secretion protein 0.34 7
Ralstonia solanacearum UW163 0.40 UW163_RS17460 flagellar hook protein FlgE 0.45 UW163_RS19145 type VI secretion system baseplate subunit TssG
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS21725 flagellar hook protein FlgE 0.45 RALBFv3_RS20030 type VI secretion system baseplate subunit TssG low > 76
Ralstonia solanacearum GMI1000 0.40 RS_RS18810 flagellar hook protein FlgE 0.45 RS_RS20695 type VI secretion system baseplate subunit TssG low > 80
Ralstonia solanacearum PSI07 0.39 RPSI07_RS01405 flagellar hook protein FlgE 0.47 RPSI07_RS02945 type VI secretion system baseplate subunit TssG low > 81
Dickeya dadantii 3937 0.38 DDA3937_RS13465 flagellar hook protein FlgE 0.12 DDA3937_RS07035 type VI secretion system baseplate subunit TssG low > 74
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS22275 flagellar hook protein FlgE 0.47 ABZR87_RS20215 type VI secretion system baseplate subunit TssG low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02589 Flagellar hook protein FlgE 0.13 OHPLBJKB_03431 hypothetical protein low > 73
Dickeya dianthicola ME23 0.37 DZA65_RS13995 flagellar hook protein FlgE 0.13 DZA65_RS08560 type VI secretion system baseplate subunit TssG low > 75
Pantoea sp. MT58 0.37 IAI47_12150 flagellar hook protein FlgE 0.15 IAI47_11585 type VI secretion system baseplate subunit TssG low > 76
Escherichia fergusonii Becca 0.37 EFB2_02898 Flagellar hook protein FlgE 0.13 EFB2_03815 hypothetical protein low > 86
Escherichia coli ECRC100 0.37 OKFHMN_03660 flgE flagellar hook protein FlgE 0.13 OKFHMN_09875 tssG Type VI secretion system protein TssG low > 80
Escherichia coli ECRC99 0.37 KEDOAH_24095 flgE flagellar hook protein FlgE 0.13 KEDOAH_18275 tssG Type VI secretion system protein TssG
Escherichia coli ECOR27 0.37 NOLOHH_21190 flgE flagellar hook protein FlgE 0.13 NOLOHH_02235 tssG Type VI secretion system protein TssG low > 75
Escherichia coli ECRC101 0.37 MCAODC_23020 flgE flagellar hook protein FlgE 0.13 MCAODC_00395 tssG Type VI secretion system protein TssG low > 87
Escherichia coli ECRC98 0.37 JDDGAC_07320 flgE flagellar hook protein FlgE 0.13 JDDGAC_13475 tssG Type VI secretion system protein TssG low > 86
Escherichia coli ECRC102 0.37 NIAGMN_24170 flgE flagellar hook protein FlgE 0.13 NIAGMN_07725 tssG Type VI secretion system protein TssG
Pectobacterium carotovorum WPP14 0.36 HER17_RS08180 flagellar hook protein FlgE 0.12 HER17_RS04860 type VI secretion system baseplate subunit TssG low > 75
Serratia liquefaciens MT49 0.36 IAI46_15945 flagellar hook protein FlgE 0.12 IAI46_05555 type VI secretion system baseplate subunit TssG low > 86
Dickeya dianthicola 67-19 0.36 HGI48_RS13510 flagellar hook protein FlgE 0.13 HGI48_RS07965 type VI secretion system baseplate subunit TssG low > 71
Pseudomonas putida KT2440 0.34 PP_4388 Flagellar hook protein FlgE 0.28 PP_3096 conserved protein of unknown function low > 96
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_3475 Flagellar hook protein FlgE 0.18 Pf1N1B4_2057 Uncharacterized protein ImpH/VasB low > 87
Pseudomonas stutzeri RCH2 0.27 Psest_4150 fagellar hook-basal body proteins 0.13 Psest_0126 type VI secretion protein, VC_A0111 family low > 67
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_11210 flagellar hook protein FlgE 0.11 CSW01_14570 type VI secretion system baseplate subunit TssG low > 62
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_05765 flagellar hook protein FlgE 0.45 H281DRAFT_05368 type VI secretion system protein ImpH low > 103
Bosea sp. OAE506 0.18 ABIE41_RS05505 flagellar hook protein FlgE 0.16 ABIE41_RS14390 type VI secretion system baseplate subunit TssG low > 77

Not shown: 29 genomes with orthologs for HSERO_RS17660 only; 16 genomes with orthologs for HSERO_RS03725 only