Conservation of cofitness between HGI48_RS06620 and HGI48_RS16830 in Dickeya dianthicola 67-19

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS06620 galactose-1-epimerase 1.0 HGI48_RS16830 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.63 18
Dickeya dianthicola ME23 0.98 DZA65_RS06975 galactose-1-epimerase 0.99 DZA65_RS17905 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 75
Dickeya dadantii 3937 0.91 DDA3937_RS06600 galactose-1-epimerase 0.95 DDA3937_RS16760 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 74
Pectobacterium carotovorum WPP14 0.67 HER17_RS14770 galactose-1-epimerase 0.75 HER17_RS04465 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 75
Serratia liquefaciens MT49 0.63 IAI46_06420 galactose-1-epimerase 0.67 IAI46_20000 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 86
Rahnella sp. WP5 0.58 EX31_RS23565 galactose-1-epimerase 0.64 EX31_RS13655 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF649 Aldose 1-epimerase (EC 5.1.3.3) 0.65 GFF1592 Multidrug resistance protein A low > 78
Escherichia coli BW25113 0.57 b0756 galM galactose-1-epimerase (mutarotase) (NCBI) 0.65 b2685 emrA multidrug efflux system (NCBI) low > 76
Escherichia coli ECRC62 0.57 BNILDI_21155 galM galactose-1-epimerase 0.65 BNILDI_11180 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 75
Escherichia coli ECOR38 0.57 HEPCGN_01545 galM galactose-1-epimerase 0.65 HEPCGN_19975 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02957 Aldose 1-epimerase 0.65 OHPLBJKB_01048 Multidrug export protein EmrA low > 73
Escherichia coli ECOR27 0.57 NOLOHH_23160 galM galactose-1-epimerase 0.65 NOLOHH_12620 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 75
Escherichia coli Nissle 1917 0.57 ECOLIN_RS04025 galactose-1-epimerase 0.65 ECOLIN_RS14965 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 55
Escherichia fergusonii Becca 0.57 EFB2_03350 Aldose 1-epimerase 0.65 EFB2_01243 Multidrug export protein EmrA low > 86
Escherichia coli ECRC101 0.57 MCAODC_25950 galM galactose-1-epimerase 0.65 MCAODC_11305 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 87
Pantoea sp. MT58 0.57 IAI47_13595 galactose-1-epimerase 0.61 IAI47_04500 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 76
Escherichia coli ECRC98 0.57 JDDGAC_10385 galM galactose-1-epimerase 0.65 JDDGAC_24445 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 0.63 58
Escherichia coli ECRC100 0.57 OKFHMN_06730 galM galactose-1-epimerase 0.65 OKFHMN_20780 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA low > 80
Escherichia coli ECRC99 0.57 KEDOAH_21235 galM galactose-1-epimerase 0.65 KEDOAH_07355 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA — —
Escherichia coli ECRC102 0.57 NIAGMN_04780 galM galactose-1-epimerase 0.65 NIAGMN_18550 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA — —
Klebsiella michiganensis M5al 0.56 BWI76_RS08610 galactose-1-epimerase 0.64 BWI76_RS22095 multidrug export protein EmrA 0.16 79
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2239 galactose mutarotase 0.66 EX28DRAFT_2768 efflux pump membrane protein (multidrug resistance protein A) low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_01383 Aldose 1-epimerase 0.67 MPMX20_03563 Multidrug export protein EmrA low > 85
Shewanella sp. ANA-3 0.28 Shewana3_3579 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.21 Shewana3_2225 secretion protein HlyD family protein (RefSeq) low > 73
Bacteroides ovatus ATCC 8483 0.28 BACOVA_03348 aldose 1-epimerase 0.17 BACOVA_01377 auxiliary transport protein, membrane fusion protein (MFP) family protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.28 BT3529 aldose 1-epimerase precursor (NCBI ptt file) 0.16 BT2794 bile salt tripartite efflux system, membrane fusion component (from data) low > 81
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS04435 galactose mutarotase 0.15 HMPREF1181_RS03700 HlyD family secretion protein low > 56
Caulobacter crescentus NA1000 0.26 CCNA_01485 aldose 1-epimerase 0.18 CCNA_03830 multidrug resistance protein A, efflux pump low > 66
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_01485 aldose 1-epimerase 0.18 CCNA_03830 multidrug resistance protein A, efflux pump low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_09120 galactose-1-epimerase 0.17 CA264_07175 secretion protein HlyD low > 74
Sinorhizobium meliloti 1021 0.23 SMc03798 aldose 1-epimerase 0.17 SMc03168 multidrug efflux system protein low > 103
Agrobacterium fabrum C58 0.22 Atu2719 aldose epimerase 0.20 Atu4478 multidrug resistance efflux pump low > 89
Rhizobium sp. OAE497 0.21 ABIE40_RS18585 aldose epimerase family protein 0.24 ABIE40_RS21115 HlyD family secretion protein low > 107

Not shown: 39 genomes with orthologs for HGI48_RS06620 only; 6 genomes with orthologs for HGI48_RS16830 only