Conservation of cofitness between HGI48_RS01920 and HGI48_RS15755 in Dickeya dianthicola 67-19

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS01920 ribonuclease E inhibitor RraB 1.0 HGI48_RS15755 membrane-bound lytic murein transglycosylase MltF 0.64 2
Dickeya dianthicola ME23 1.00 DZA65_RS01990 ribonuclease E inhibitor RraB 1.00 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF low > 75
Dickeya dadantii 3937 0.72 DDA3937_RS01945 ribonuclease E inhibitor RraB 0.97 DDA3937_RS15660 membrane-bound lytic murein transglycosylase MltF 0.70 16
Erwinia tracheiphila SCR3 0.69 LU632_RS20905 rraB ribonuclease E inhibitor RraB 0.65 LU632_RS17980 mltF membrane-bound lytic murein transglycosylase MltF 0.43 71
Pectobacterium carotovorum WPP14 0.68 HER17_RS19495 ribonuclease E inhibitor RraB 0.76 HER17_RS05905 membrane-bound lytic murein transglycosylase MltF 0.47 55
Escherichia coli ECRC98 0.66 JDDGAC_15470 rraB ribonuclease E inhibitor RraB 0.62 JDDGAC_25130 mltF membrane-bound lytic murein transglycosylase MltF low > 86
Escherichia coli ECRC102 0.66 NIAGMN_09680 rraB ribonuclease E inhibitor RraB 0.62 NIAGMN_19235 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli BW25113 0.66 b4255 yjgD hypothetical protein (NCBI) 0.62 b2558 mltF predicted periplasmic binding protein/transglycosylase (RefSeq) low > 76
Escherichia coli ECOR38 0.66 HEPCGN_10020 rraB ribonuclease E inhibitor RraB 0.62 HEPCGN_20610 mltF membrane-bound lytic murein transglycosylase MltF low > 87
Escherichia coli ECRC100 0.66 OKFHMN_11830 rraB ribonuclease E inhibitor RraB 0.62 OKFHMN_21465 mltF membrane-bound lytic murein transglycosylase MltF low > 80
Escherichia coli ECOR27 0.66 NOLOHH_04085 rraB ribonuclease E inhibitor RraB 0.62 NOLOHH_13140 mltF membrane-bound lytic murein transglycosylase MltF low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03781 Regulator of ribonuclease activity B 0.62 OHPLBJKB_01149 Membrane-bound lytic murein transglycosylase F low > 73
Escherichia coli ECRC62 0.66 BNILDI_07430 rraB ribonuclease E inhibitor RraB 0.62 BNILDI_11940 mltF membrane-bound lytic murein transglycosylase MltF low > 75
Escherichia coli ECRC101 0.66 MCAODC_02335 rraB ribonuclease E inhibitor RraB 0.62 MCAODC_11995 mltF membrane-bound lytic murein transglycosylase MltF low > 87
Escherichia coli ECRC99 0.66 KEDOAH_16325 rraB ribonuclease E inhibitor RraB 0.62 KEDOAH_06755 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia fergusonii Becca 0.65 EFB2_04280 Regulator of ribonuclease activity B 0.62 EFB2_01338 Membrane-bound lytic murein transglycosylase F low > 86
Serratia liquefaciens MT49 0.65 IAI46_02325 ribonuclease E inhibitor RraB 0.66 IAI46_19480 membrane-bound lytic murein transglycosylase MltF low > 86
Escherichia coli Nissle 1917 0.63 ECOLIN_RS24670 ribonuclease E inhibitor RraB 0.62 ECOLIN_RS14475 membrane-bound lytic murein transglycosylase MltF low > 55
Rahnella sp. WP5 0.62 EX31_RS12830 ribonuclease E inhibitor RraB 0.61 EX31_RS21890 membrane-bound lytic murein transglycosylase MltF low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF941 Ribonuclease E inhibitor RraB 0.62 GFF2461 Transglycosylase, Slt family low > 78
Klebsiella michiganensis M5al 0.60 BWI76_RS03015 RNase E inhibitor protein 0.61 BWI76_RS21275 lytic transglycosylase F low > 92
Enterobacter sp. TBS_079 0.57 MPMX20_00557 Regulator of ribonuclease activity B 0.62 MPMX20_03427 Membrane-bound lytic murein transglycosylase F low > 85
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3462 Uncharacterized protein conserved in bacteria 0.60 EX28DRAFT_0090 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein low > 76
Shewanella amazonensis SB2B 0.52 Sama_3138 hypothetical protein (RefSeq) 0.38 Sama_2351 Slt family transglycosylase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_02230 ribonuclease E inhibitor RraB 0.46 CSW01_04460 lytic transglycosylase F low > 62
Shewanella oneidensis MR-1 0.49 SO0568 conserved hypothetical protein (NCBI ptt file) 0.37 SO3288 transglycosylase, Slt family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.49 Shewana3_0569 hypothetical protein (RefSeq) 0.38 Shewana3_1239 lytic transglycosylase, catalytic (RefSeq) — —
Shewanella loihica PV-4 0.48 Shew_0451 hypothetical protein (RefSeq) 0.36 Shew_1300 lytic transglycosylase, catalytic (RefSeq) low > 60

Not shown: 1 genomes with orthologs for HGI48_RS01920 only; 28 genomes with orthologs for HGI48_RS15755 only