Conservation of cofitness between HGI48_RS01920 and HGI48_RS04355 in Dickeya dianthicola 67-19

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS01920 ribonuclease E inhibitor RraB 1.0 HGI48_RS04355 oxygen-dependent coproporphyrinogen oxidase 0.58 7
Dickeya dianthicola ME23 1.00 DZA65_RS01990 ribonuclease E inhibitor RraB 1.00 DZA65_RS04275 oxygen-dependent coproporphyrinogen oxidase — —
Dickeya dadantii 3937 0.72 DDA3937_RS01945 ribonuclease E inhibitor RraB 0.97 DDA3937_RS04365 oxygen-dependent coproporphyrinogen oxidase — —
Erwinia tracheiphila SCR3 0.69 LU632_RS20905 rraB ribonuclease E inhibitor RraB 0.76 LU632_RS06720 hemF oxygen-dependent coproporphyrinogen oxidase — —
Pectobacterium carotovorum WPP14 0.68 HER17_RS19495 ribonuclease E inhibitor RraB 0.79 HER17_RS17265 oxygen-dependent coproporphyrinogen oxidase low > 75
Escherichia coli ECRC62 0.66 BNILDI_07430 rraB ribonuclease E inhibitor RraB 0.75 BNILDI_12640 hemF oxygen-dependent coproporphyrinogen oxidase low > 75
Escherichia coli ECRC101 0.66 MCAODC_02335 rraB ribonuclease E inhibitor RraB 0.73 MCAODC_12625 hemF oxygen-dependent coproporphyrinogen oxidase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03781 Regulator of ribonuclease activity B 0.75 OHPLBJKB_01286 Oxygen-dependent coproporphyrinogen-III oxidase low > 73
Escherichia coli BW25113 0.66 b4255 yjgD hypothetical protein (NCBI) 0.75 b2436 hemF coproporphyrinogen III oxidase (NCBI) low > 76
Escherichia coli ECRC100 0.66 OKFHMN_11830 rraB ribonuclease E inhibitor RraB 0.73 OKFHMN_22095 hemF oxygen-dependent coproporphyrinogen oxidase low > 80
Escherichia coli ECRC98 0.66 JDDGAC_15470 rraB ribonuclease E inhibitor RraB 0.73 JDDGAC_26045 hemF oxygen-dependent coproporphyrinogen oxidase low > 86
Escherichia coli ECRC99 0.66 KEDOAH_16325 rraB ribonuclease E inhibitor RraB 0.73 KEDOAH_06125 hemF oxygen-dependent coproporphyrinogen oxidase — —
Escherichia coli ECOR27 0.66 NOLOHH_04085 rraB ribonuclease E inhibitor RraB 0.75 NOLOHH_13775 hemF oxygen-dependent coproporphyrinogen oxidase low > 75
Escherichia coli BL21 0.66 ECD_04121 protein inhibitor of RNase E 0.75 ECD_02336 coproporphyrinogen III oxidase low > 61
Escherichia coli ECOR38 0.66 HEPCGN_10020 rraB ribonuclease E inhibitor RraB 0.75 HEPCGN_21270 hemF oxygen-dependent coproporphyrinogen oxidase low > 87
Escherichia coli ECRC102 0.66 NIAGMN_09680 rraB ribonuclease E inhibitor RraB 0.73 NIAGMN_19865 hemF oxygen-dependent coproporphyrinogen oxidase — —
Serratia liquefaciens MT49 0.65 IAI46_02325 ribonuclease E inhibitor RraB 0.76 IAI46_18545 oxygen-dependent coproporphyrinogen oxidase low > 86
Escherichia fergusonii Becca 0.65 EFB2_04280 Regulator of ribonuclease activity B 0.74 EFB2_01443 Oxygen-dependent coproporphyrinogen-III oxidase low > 86
Escherichia coli Nissle 1917 0.63 ECOLIN_RS24670 ribonuclease E inhibitor RraB 0.75 ECOLIN_RS13965 oxygen-dependent coproporphyrinogen oxidase low > 55
Rahnella sp. WP5 0.62 EX31_RS12830 ribonuclease E inhibitor RraB 0.79 EX31_RS20260 oxygen-dependent coproporphyrinogen oxidase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF941 Ribonuclease E inhibitor RraB 0.75 GFF2066 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) low > 78
Klebsiella michiganensis M5al 0.60 BWI76_RS03015 RNase E inhibitor protein 0.70 BWI76_RS20740 coproporphyrinogen III oxidase low > 92
Enterobacter sp. TBS_079 0.57 MPMX20_00557 Regulator of ribonuclease activity B 0.74 MPMX20_03323 Oxygen-dependent coproporphyrinogen-III oxidase low > 85
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3462 Uncharacterized protein conserved in bacteria 0.73 EX28DRAFT_0199 coproporphyrinogen oxidase (EC 1.3.3.3) low > 76
Shewanella amazonensis SB2B 0.52 Sama_3138 hypothetical protein (RefSeq) 0.69 Sama_0050 coproporphyrinogen III oxidase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_02230 ribonuclease E inhibitor RraB 0.68 CSW01_00275 coproporphyrinogen III oxidase — —
Shewanella oneidensis MR-1 0.49 SO0568 conserved hypothetical protein (NCBI ptt file) 0.70 SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.49 Shewana3_0569 hypothetical protein (RefSeq) 0.71 Shewana3_0041 coproporphyrinogen III oxidase (RefSeq) — —
Shewanella loihica PV-4 0.48 Shew_0451 hypothetical protein (RefSeq) 0.72 Shew_3729 coproporphyrinogen III oxidase (RefSeq) low > 60

Not shown: 0 genomes with orthologs for HGI48_RS01920 only; 58 genomes with orthologs for HGI48_RS04355 only