Conservation of cofitness between HGI48_RS03515 and HGI48_RS00935 in Dickeya dianthicola 67-19

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS03515 NAD-dependent epimerase/dehydratase family protein 1.0 HGI48_RS00935 transcription/translation regulatory transformer protein RfaH 0.87 2
Dickeya dianthicola ME23 0.99 DZA65_RS03630 NAD-dependent epimerase/dehydratase family protein 1.00 DZA65_RS00995 transcription/translation regulatory transformer protein RfaH 0.66 18
Dickeya dadantii 3937 0.90 DDA3937_RS03415 NAD-dependent epimerase/dehydratase family protein 0.96 DDA3937_RS20290 transcription/translation regulatory transformer protein RfaH 0.53 45
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_01355 UDP-glucose 4-epimerase 0.45 CSW01_05050 transcription/translation regulatory transformer protein RfaH low > 62
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_339 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.33 Pf1N1B4_5950 Transcriptional activator RfaH — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS02375 NAD-dependent dehydratase 0.29 HSERO_RS02425 transcriptional activator low > 78
Pseudomonas stutzeri RCH2 0.43 Psest_1823 Nucleoside-diphosphate-sugar epimerases 0.30 Psest_2605 transcriptional activator RfaH low > 67
Shewanella oneidensis MR-1 0.39 SO3173 UDP-galactose 4-epimerase, putative (NCBI ptt file) 0.27 SO3194 transcriptional activator rfaH, putative (NCBI ptt file) 0.93 6
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_3638 UDP-glucose 4-epimerase, putative 0.30 Psyr_3226 Transcriptional activator RfaH low > 86
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_3638 UDP-glucose 4-epimerase, putative 0.30 Psyr_3226 Transcriptional activator RfaH low > 86
Magnetospirillum magneticum AMB-1 0.36 AMB_RS00195 nucleoside-diphosphate sugar epimerase 0.19 AMB_RS00245 transcriptional activator RfaH — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS13025 NAD-dependent epimerase/dehydratase family protein 0.17 ABCV34_RS12845 transcription termination/antitermination NusG family protein low > 48
Enterobacter asburiae PDN3 0.32 EX28DRAFT_0516 Nucleoside-diphosphate-sugar epimerases 0.71 EX28DRAFT_4505 transcription elongation factor/antiterminator RfaH low > 76
Shewanella amazonensis SB2B 0.26 Sama_2249 hypothetical protein (RefSeq) 0.26 Sama_2265 transcriptional activator rfaH, putative (RefSeq) 0.68 7
Marinobacter adhaerens HP15 0.26 HP15_2386 UDP-glucose 4-epimerase 0.28 HP15_p187g93 transcriptional activator RfaH low > 73
Pectobacterium carotovorum WPP14 0.10 HER17_RS21015 NAD(P)-dependent oxidoreductase 0.82 HER17_RS20570 transcription/translation regulatory transformer protein RfaH low > 75

Not shown: 19 genomes with orthologs for HGI48_RS03515 only; 23 genomes with orthologs for HGI48_RS00935 only