Conservation of cofitness between HER17_RS12895 and HER17_RS14880 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12895 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 1.0 HER17_RS14880 Tol-Pal system protein TolQ 0.80 7
Serratia liquefaciens MT49 0.80 IAI46_17305 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.94 IAI46_06320 Tol-Pal system protein TolQ — —
Erwinia tracheiphila SCR3 0.75 LU632_RS17465 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.91 LU632_RS16045 tolQ Tol-Pal system protein TolQ — —
Rahnella sp. WP5 0.74 EX31_RS19120 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.91 EX31_RS23480 Tol-Pal system protein TolQ low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF3761 Lipoprotein spr precursor 0.86 GFF4651 MotA/TolQ/ExbB proton channel family protein — —
Dickeya dadantii 3937 0.72 DDA3937_RS09195 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.93 DDA3937_RS06500 Tol-Pal system protein TolQ — —
Enterobacter sp. TBS_079 0.72 MPMX20_03141 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.91 MPMX20_01366 Tol-Pal system protein TolQ low > 85
Dickeya dianthicola ME23 0.72 DZA65_RS09540 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.92 DZA65_RS06895 Tol-Pal system protein TolQ 0.47 31
Dickeya dianthicola 67-19 0.72 HGI48_RS09235 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.92 HGI48_RS06545 Tol-Pal system protein TolQ low > 71
Enterobacter asburiae PDN3 0.71 EX28DRAFT_0386 Cell wall-associated hydrolases (invasion-associated proteins) 0.91 EX28DRAFT_2254 TolQ protein — —
Escherichia coli ECOR38 0.71 HEPCGN_22665 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.86 HEPCGN_01450 tolQ Tol-Pal system protein TolQ low > 87
Escherichia coli ECRC99 0.71 KEDOAH_04785 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.86 KEDOAH_21145 tolQ Tol-Pal system protein TolQ — —
Escherichia coli ECRC62 0.71 BNILDI_13895 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.86 BNILDI_21250 tolQ Tol-Pal system protein TolQ low > 75
Escherichia coli Nissle 1917 0.71 ECOLIN_RS12720 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.86 ECOLIN_RS03925 Tol-Pal system protein TolQ low > 55
Escherichia coli ECOR27 0.71 NOLOHH_14975 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.86 NOLOHH_23255 tolQ Tol-Pal system protein TolQ — —
Escherichia fergusonii Becca 0.71 EFB2_01681 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.86 EFB2_03369 Tol-Pal system protein TolQ low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01534 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.86 OHPLBJKB_02976 Protein TolQ low > 73
Escherichia coli ECRC101 0.71 MCAODC_14450 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.86 MCAODC_26040 tolQ Tol-Pal system protein TolQ low > 87
Escherichia coli BL21 0.71 ECD_02105 murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase 0.86 ECD_00697 membrane spanning protein in TolA-TolQ-TolR complex — —
Escherichia coli ECRC98 0.71 JDDGAC_27360 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.86 JDDGAC_10475 tolQ Tol-Pal system protein TolQ low > 86
Escherichia coli ECRC102 0.71 NIAGMN_21165 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.86 NIAGMN_04870 tolQ Tol-Pal system protein TolQ — —
Escherichia coli BW25113 0.71 b2175 spr predicted peptidase, outer membrane lipoprotein (NCBI) 0.86 b0737 tolQ membrane spanning protein in TolA-TolQ-TolR complex (NCBI) low > 76
Escherichia coli ECRC100 0.71 OKFHMN_23400 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.86 OKFHMN_06820 tolQ Tol-Pal system protein TolQ — —
Klebsiella michiganensis M5al 0.71 BWI76_RS19770 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.91 BWI76_RS08520 colicin transporter TolQ 0.48 27
Pantoea sp. MT58 0.67 IAI47_06625 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.90 IAI47_13700 Tol-Pal system protein TolQ low > 76
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_02660 peptidase P60 0.55 AO353_03570 protein TolQ — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_16170 hypothetical protein 0.14 CA264_04950 biopolymer transporter ExbB — —
Pseudomonas sp. RS175 0.26 PFR28_03213 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 0.54 PFR28_03410 Tol-Pal system protein TolQ — —
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_19115 peptidase P60 0.54 AO356_18035 protein TolQ — —
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS05845 C40 family peptidase 0.16 HMPREF1058_RS08320 MotA/TolQ/ExbB proton channel family protein low > 67
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_3684 NLP/P60 0.54 Psyr_1412 Cell division and transport-associated protein TolQ — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_3684 NLP/P60 0.54 Psyr_1412 Cell division and transport-associated protein TolQ — —
Pseudomonas sp. S08-1 0.23 OH686_05015 NLP/P60 family protein 0.55 OH686_19145 protein TolQ — —

Not shown: 2 genomes with orthologs for HER17_RS12895 only; 59 genomes with orthologs for HER17_RS14880 only