Conservation of cofitness between HER17_RS07710 and HER17_RS11460 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS07710 UvrY/SirA/GacA family response regulator transcription factor 1.0 HER17_RS11460 osmotically-inducible lipoprotein OsmE 0.69 13
Dickeya dianthicola ME23 0.92 DZA65_RS14290 UvrY/SirA/GacA family response regulator transcription factor 0.62 DZA65_RS11770 osmotically-inducible lipoprotein OsmE low > 75
Dickeya dianthicola 67-19 0.91 HGI48_RS13800 UvrY/SirA/GacA family response regulator transcription factor 0.62 HGI48_RS11425 osmotically-inducible lipoprotein OsmE low > 71
Dickeya dadantii 3937 0.91 DDA3937_RS13705 UvrY/SirA/GacA family response regulator transcription factor 0.64 DDA3937_RS11385 osmotically-inducible lipoprotein OsmE low > 74
Serratia liquefaciens MT49 0.88 IAI46_09205 UvrY/SirA/GacA family response regulator transcription factor 0.56 IAI46_17390 osmotically-inducible lipoprotein OsmE low > 86
Rahnella sp. WP5 0.87 EX31_RS24145 UvrY/SirA/GacA family response regulator transcription factor 0.57 EX31_RS17925 osmotically-inducible lipoprotein OsmE low > 89
Pantoea sp. MT58 0.86 IAI47_12470 UvrY/SirA/GacA family response regulator transcription factor 0.54 IAI47_11040 osmotically-inducible lipoprotein OsmE low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF1699 BarA-associated response regulator UvrY (= GacA = SirA) 0.50 GFF3501 Osmotically inducible lipoprotein E precursor low > 78
Escherichia coli Nissle 1917 0.84 ECOLIN_RS10900 UvrY/SirA/GacA family response regulator transcription factor 0.50 ECOLIN_RS09695 osmotically-inducible lipoprotein OsmE — —
Escherichia coli BW25113 0.84 b1914 uvrY response regulator (NCBI) 0.50 b1739 osmE DNA-binding transcriptional activator (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_01815 Response regulator UvrY 0.50 OHPLBJKB_01993 Osmotically-inducible putative lipoprotein OsmE low > 73
Escherichia fergusonii Becca 0.84 EFB2_02032 Response regulator UvrY 0.50 EFB2_02254 Osmotically-inducible putative lipoprotein OsmE low > 86
Escherichia coli ECRC62 0.84 BNILDI_15230 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.50 BNILDI_16255 osmE osmotically-inducible lipoprotein OsmE low > 75
Escherichia coli ECRC100 0.84 OKFHMN_25820 uvrC excinuclease ABC subunit UvrC 0.50 OKFHMN_26955 osmE osmotically-inducible lipoprotein OsmE low > 80
Escherichia coli ECRC98 0.84 JDDGAC_00410 uvrC excinuclease ABC subunit UvrC 0.50 JDDGAC_01530 osmE osmotically-inducible lipoprotein OsmE low > 86
Escherichia coli ECRC101 0.84 MCAODC_19570 uvrC excinuclease ABC subunit UvrC 0.50 MCAODC_18455 osmE osmotically-inducible lipoprotein OsmE low > 87
Escherichia coli ECOR38 0.84 HEPCGN_04175 uvrC excinuclease ABC subunit UvrC 0.50 HEPCGN_05320 osmE osmotically-inducible lipoprotein OsmE low > 87
Escherichia coli ECRC102 0.84 NIAGMN_02230 uvrC excinuclease ABC subunit UvrC 0.50 NIAGMN_01110 osmE osmotically-inducible lipoprotein OsmE — —
Escherichia coli ECRC99 0.84 KEDOAH_02270 uvrC excinuclease ABC subunit UvrC 0.50 KEDOAH_01155 osmE osmotically-inducible lipoprotein OsmE — —
Escherichia coli ECOR27 0.84 NOLOHH_16440 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.50 NOLOHH_17470 osmE osmotically-inducible lipoprotein OsmE low > 75
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0633 two component transcriptional regulator, LuxR family 0.50 EX28DRAFT_1743 SmpA / OmlA family low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_02839 Response regulator UvrY 0.51 MPMX20_01875 Osmotically-inducible putative lipoprotein OsmE low > 85
Erwinia tracheiphila SCR3 0.83 LU632_RS10190 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.54 LU632_RS10840 osmE osmotically-inducible lipoprotein OsmE — —
Klebsiella michiganensis M5al 0.82 BWI76_RS18335 DNA-binding response regulator 0.48 BWI76_RS11720 transcriptional regulator low > 92
Pseudomonas stutzeri RCH2 0.57 Psest_2260 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.26 Psest_3249 SmpA / OmlA family. low > 67
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_2897 regulatory protein, LuxR:Response regulator receiver 0.30 Psyr_4446 SmpA/OmlA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_2897 regulatory protein, LuxR:Response regulator receiver 0.30 Psyr_4446 SmpA/OmlA low > 86
Pseudomonas putida KT2440 0.55 PP_4099 two-componenent system BarA/UvrY - regulatory subunit 0.29 PP_4855 Osmotically-inducible lipoprotein OsmE low > 96
Pseudomonas sp. S08-1 0.53 OH686_00335 BarA-associated response regulator UvrY ( GacA SirA) 0.27 OH686_03360 hypothetical protein low > 80
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_21830 chemotaxis protein CheY 0.25 AO353_01010 cell envelope protein SmpA low > 101
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_5619 BarA-associated response regulator UvrY (= GacA = SirA) 0.24 Pf1N1B4_5795 Osmotically inducible lipoprotein OsmE low > 87
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_2885 BarA-associated response regulator UvrY (= GacA = SirA) 0.23 PfGW456L13_3812 Osmotically inducible lipoprotein OsmE low > 87

Not shown: 49 genomes with orthologs for HER17_RS07710 only; 1 genomes with orthologs for HER17_RS11460 only