Conservation of cofitness between HER17_RS09575 and HER17_RS05505 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS09575 transcriptional regulator TyrR 1.0 HER17_RS05505 polyamine aminopropyltransferase 0.66 3
Dickeya dadantii 3937 0.78 DDA3937_RS12390 transcriptional regulator TyrR 0.87 DDA3937_RS16010 polyamine aminopropyltransferase low > 74
Serratia liquefaciens MT49 0.78 IAI46_13470 transcriptional regulator TyrR 0.85 IAI46_21290 polyamine aminopropyltransferase low > 86
Dickeya dianthicola 67-19 0.77 HGI48_RS12460 transcriptional regulator TyrR 0.87 HGI48_RS16130 polyamine aminopropyltransferase low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS12910 transcriptional regulator TyrR 0.87 DZA65_RS17215 polyamine aminopropyltransferase low > 75
Rahnella sp. WP5 0.74 EX31_RS06335 transcriptional regulator TyrR 0.85 EX31_RS03375 polyamine aminopropyltransferase low > 89
Pantoea sp. MT58 0.71 IAI47_09440 transcriptional regulator TyrR 0.84 IAI47_15710 polyamine aminopropyltransferase low > 76
Erwinia tracheiphila SCR3 0.71 LU632_RS11530 tyrR transcriptional regulator TyrR 0.83 LU632_RS20150 speE polyamine aminopropyltransferase low > 74
Enterobacter sp. TBS_079 0.66 MPMX20_02454 Transcriptional regulatory protein TyrR 0.79 MPMX20_00815 Polyamine aminopropyltransferase low > 85
Klebsiella michiganensis M5al 0.66 BWI76_RS12485 TyrR family transcriptional regulator 0.79 BWI76_RS04925 spermidine synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2679 Transcriptional repressor protein TyrR 0.79 GFF107 Spermidine synthase (EC 2.5.1.16) low > 78
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0994 Transcriptional regulator of aromatic amino acids metabolism 0.79 EX28DRAFT_3718 spermidine synthase low > 76
Escherichia coli Nissle 1917 0.65 ECOLIN_RS07945 transcriptional regulator TyrR 0.80 ECOLIN_RS00675 polyamine aminopropyltransferase — —
Escherichia fergusonii Becca 0.65 EFB2_02604 Transcriptional regulatory protein TyrR 0.80 EFB2_03924 Polyamine aminopropyltransferase low > 86
Escherichia coli ECRC98 0.65 JDDGAC_04850 tyrR transcriptional regulator TyrR 0.80 JDDGAC_14060 speE polyamine aminopropyltransferase low > 86
Escherichia coli ECRC99 0.65 KEDOAH_26470 tyrR transcriptional regulator TyrR 0.80 KEDOAH_17690 speE polyamine aminopropyltransferase — —
Escherichia coli ECRC102 0.65 NIAGMN_26475 tyrR transcriptional regulator TyrR 0.80 NIAGMN_08315 speE polyamine aminopropyltransferase — —
Escherichia coli ECOR38 0.65 HEPCGN_25885 tyrR transcriptional regulator TyrR 0.80 HEPCGN_08445 speE polyamine aminopropyltransferase low > 87
Escherichia coli ECRC101 0.65 MCAODC_15965 tyrR transcriptional regulator TyrR 0.80 MCAODC_00980 speE polyamine aminopropyltransferase low > 87
Escherichia coli ECRC100 0.65 OKFHMN_02305 tyrR transcriptional regulator TyrR 0.80 OKFHMN_10465 speE polyamine aminopropyltransferase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02359 Transcriptional regulatory protein TyrR 0.80 OHPLBJKB_03540 Polyamine aminopropyltransferase low > 73
Escherichia coli ECRC62 0.65 BNILDI_18150 tyrR transcriptional regulator TyrR 0.80 BNILDI_08800 speE polyamine aminopropyltransferase low > 75
Escherichia coli ECOR27 0.65 NOLOHH_20000 tyrR transcriptional regulator TyrR 0.80 NOLOHH_02810 speE polyamine aminopropyltransferase low > 75
Escherichia coli BL21 0.65 ECD_01300 aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase 0.80 ECD_00120 spermidine synthase (putrescine aminopropyltransferase) low > 61
Escherichia coli BW25113 0.65 b1323 tyrR DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) 0.80 b0121 speE spermidine synthase (NCBI) low > 76
Shewanella amazonensis SB2B 0.47 Sama_2220 transcriptional regulatory protein TyrR (RefSeq) 0.62 Sama_1964 spermidine synthase (RefSeq) low > 62
Pseudomonas sp. S08-1 0.40 OH686_21240 Phenylalanine hydroxylase transcriptional activator PhhR 0.64 OH686_03215 spermidine synthase low > 80
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_18590 AAA family ATPase 0.65 AO353_02195 spermidine synthase low > 101
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4393 Phenylalanine hydroxylase transcriptional activator PhhR 0.65 PfGW456L13_4155 Spermidine synthase (EC 2.5.1.16) low > 87
Pseudomonas stutzeri RCH2 0.38 Psest_0782 Transcriptional regulator of aromatic amino acids metabolism 0.61 Psest_1911 spermidine synthase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_3574 Helix-turn-helix, Fis-type 0.64 Psyr_1864 spermidine synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_3574 Helix-turn-helix, Fis-type 0.64 Psyr_1864 spermidine synthase low > 86

Not shown: 16 genomes with orthologs for HER17_RS09575 only; 18 genomes with orthologs for HER17_RS05505 only