Conservation of cofitness between HER17_RS11620 and HER17_RS03985 in Pectobacterium carotovorum WPP14

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11620 NUDIX hydrolase 1.0 HER17_RS03985 translocation/assembly module TamB 0.79 9
Escherichia coli BL21 0.78 ECD_01132 bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase 0.55 ECD_04092 translocation and assembly module for autotransporter export, inner membrane subunit — —
Escherichia coli Nissle 1917 0.78 ECOLIN_RS06630 phosphatase NudJ 0.57 ECOLIN_RS24515 autotransporter assembly complex protein TamB — —
Escherichia coli BW25113 0.78 b1134 ymfB bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) 0.57 b4221 ytfN hypothetical protein (NCBI) low > 76
Escherichia coli ECRC98 0.78 JDDGAC_06615 nudJ phosphatase NudJ 0.55 JDDGAC_15635 tamB autotransporter assembly complex protein TamB low > 86
Escherichia coli ECRC100 0.78 OKFHMN_00750 nudJ phosphatase NudJ 0.55 OKFHMN_11995 tamB autotransporter assembly complex protein TamB low > 80
Escherichia coli ECRC62 0.78 BNILDI_19060 nudJ phosphatase NudJ 0.57 BNILDI_07260 tamB autotransporter assembly complex protein TamB low > 75
Escherichia fergusonii Becca 0.78 EFB2_02841 Phosphatase NudJ 0.57 EFB2_04308 Translocation and assembly module subunit TamB 0.27 73
Escherichia coli ECRC101 0.78 MCAODC_22335 nudJ phosphatase NudJ 0.55 MCAODC_02510 tamB autotransporter assembly complex protein TamB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_02534 Phosphatase NudJ 0.55 OHPLBJKB_03812 Translocation and assembly module subunit TamB low > 73
Escherichia coli ECOR38 0.78 HEPCGN_24225 nudJ phosphatase NudJ 0.57 HEPCGN_10195 tamB autotransporter assembly complex protein TamB low > 87
Escherichia coli ECRC99 0.78 KEDOAH_24835 nudJ phosphatase NudJ 0.55 KEDOAH_16160 tamB autotransporter assembly complex protein TamB — —
Escherichia coli ECRC102 0.78 NIAGMN_24895 nudJ phosphatase NudJ 0.55 NIAGMN_09845 tamB autotransporter assembly complex protein TamB — —
Escherichia coli ECOR27 0.78 NOLOHH_20895 nudJ phosphatase NudJ 0.57 NOLOHH_04255 tamB autotransporter assembly complex protein TamB low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS11480 NUDIX hydrolase 0.57 DDA3937_RS17155 translocation/assembly module TamB low > 74
Serratia liquefaciens MT49 0.77 IAI46_10445 NUDIX hydrolase 0.67 IAI46_01775 translocation/assembly module TamB low > 86
Dickeya dianthicola ME23 0.76 DZA65_RS11860 NUDIX hydrolase 0.58 DZA65_RS18290 translocation/assembly module TamB low > 75
Dickeya dianthicola 67-19 0.76 HGI48_RS11525 NUDIX hydrolase 0.56 HGI48_RS17210 translocation/assembly module TamB low > 71
Klebsiella michiganensis M5al 0.75 BWI76_RS11320 NUDIX hydrolase 0.56 BWI76_RS02780 translocation and assembly module TamB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3419 Nudix-like NDP and NTP phosphohydrolase YmfB 0.57 GFF875 Uncharacterized protein YtfN low > 78
Enterobacter sp. TBS_079 0.71 MPMX20_01818 Phosphatase NudJ 0.56 MPMX20_00504 Translocation and assembly module subunit TamB low > 85
Erwinia tracheiphila SCR3 0.71 LU632_RS14570 NUDIX hydrolase 0.55 LU632_RS02110 translocation/assembly module TamB low > 74
Rahnella sp. WP5 0.71 EX31_RS24580 NUDIX hydrolase 0.63 EX31_RS08690 translocation/assembly module TamB 0.47 2
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1796 ADP-ribose pyrophosphatase 0.55 EX28DRAFT_3407 Uncharacterized protein conserved in bacteria low > 76
Pantoea sp. MT58 0.65 IAI47_11910 NUDIX hydrolase 0.59 IAI47_02720 translocation/assembly module TamB low > 76
Shewanella amazonensis SB2B 0.41 Sama_2061 MutT/nudix family protein (RefSeq) 0.14 Sama_1615 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.40 Shewana3_1748 NUDIX hydrolase (RefSeq) 0.11 Shewana3_1893 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO2631 MutT/nudix family protein (NCBI ptt file) 0.15 SO2113 conserved hypothetical protein (NCBI ptt file) low > 76
Ralstonia solanacearum GMI1000 0.27 RS_RS13630 NUDIX hydrolase 0.03 RS_RS11965 translocation/assembly module TamB low > 80

Not shown: 39 genomes with orthologs for HER17_RS11620 only; 2 genomes with orthologs for HER17_RS03985 only