Conservation of cofitness between HEPCGN_04840 and HEPCGN_22210 in Escherichia coli ECOR38

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.0 HEPCGN_22210 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.61 2
Escherichia coli ECOR27 0.99 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase — —
Escherichia coli ECRC62 0.99 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F 0.99 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 73
Escherichia coli BL21 0.98 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 0.99 ECD_02179 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent — —
Escherichia coli BW25113 0.98 b1835 yebU putative nucleolar proteins (VIMSS) 0.97 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) low > 76
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.97 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase — —
Escherichia fergusonii Becca 0.98 EFB2_02166 Ribosomal RNA small subunit methyltransferase F 0.95 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 86
Escherichia coli ECRC101 0.98 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.98 MCAODC_14035 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 87
Escherichia coli ECRC98 0.98 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.98 JDDGAC_26960 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 86
Escherichia coli ECRC99 0.98 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.98 KEDOAH_05200 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase — —
Escherichia coli ECRC102 0.98 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.98 NIAGMN_20765 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase — —
Escherichia coli ECRC100 0.98 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.98 OKFHMN_22995 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) 0.84 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase 0.81 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F 0.82 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 85
Klebsiella michiganensis M5al 0.77 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.79 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 92
Pantoea sp. MT58 0.70 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.71 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Serratia liquefaciens MT49 0.69 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.71 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 86
Rahnella sp. WP5 0.67 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.70 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 89
Pectobacterium carotovorum WPP14 0.67 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.72 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.78 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.77 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.77 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 71
Shewanella sp. ANA-3 0.51 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.27 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) low > 73
Shewanella loihica PV-4 0.51 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.25 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.50 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) 0.24 SO3270 polysaccharide biosynthesis protein (NCBI ptt file) low > 76
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2042 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) 0.22 BT0612 putative aminotransferase (NCBI ptt file) low > 81
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_1153 tRNA and rRNA cytosine-C5-methylases 0.20 Echvi_3862 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 79
Bacteroides stercoris CC31F 0.18 HMPREF1181_RS08100 rRNA cytosine-C5-methyltransferase 0.16 HMPREF1181_RS14960 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 56
Bacteroides ovatus ATCC 8483 0.18 BACOVA_00671 NOL1/NOP2/sun family protein 0.18 BACOVA_03734 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 94
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_05610 rRNA methyltransferase 0.26 CA264_07955 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS00225 RNA methyltransferase 0.22 ABZR88_RS08945 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 71

Not shown: 4 genomes with orthologs for HEPCGN_04840 only; 53 genomes with orthologs for HEPCGN_22210 only