Conservation of cofitness between HEPCGN_20540 and HEPCGN_21815 in Escherichia coli ECOR38

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.0 HEPCGN_21815 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.94 1
Escherichia fergusonii Becca 1.00 EFB2_01326 Protein RseC 1.00 EFB2_01528 50S ribosomal protein L3 glutamine methyltransferase low > 86
Escherichia coli ECOR27 0.99 NOLOHH_13070 rseC SoxR-reducing system protein RseC 0.99 NOLOHH_14245 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_01375 50S ribosomal protein L3 glutamine methyltransferase low > 73
Escherichia coli BW25113 0.99 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b2330 yfcB putative adenine-specific methylase (VIMSS) low > 76
Escherichia coli ECRC101 0.99 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_13650 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.70 17
Escherichia coli ECRC62 0.99 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.00 BNILDI_13165 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase low > 75
Escherichia coli ECRC100 0.99 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_22610 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase low > 80
Escherichia coli ECRC98 0.99 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.00 JDDGAC_26570 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.90 51
Escherichia coli ECRC102 0.99 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_20385 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase — —
Escherichia coli ECRC99 0.99 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_05585 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase — —
Escherichia coli BL21 0.99 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_02255 N5-glutamine methyltransferase 0.72 13
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 1.00 ECOLIN_RS13495 50S ribosomal protein L3 N(5)-glutamine methyltransferase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.96 GFF1951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p low > 78
Klebsiella michiganensis M5al 0.78 BWI76_RS21340 SoxR reducing system protein RseC 0.91 BWI76_RS20440 50S ribosomal protein L3 N(5)-glutamine methyltransferase low > 92
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.93 EX28DRAFT_0274 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific low > 76
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.93 MPMX20_03265 50S ribosomal protein L3 glutamine methyltransferase low > 85
Pantoea sp. MT58 0.62 IAI47_04865 SoxR-reducing system protein RseC 0.87 IAI47_06145 50S ribosomal protein L3 N(5)-glutamine methyltransferase low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.84 EX31_RS19690 50S ribosomal protein L3 N(5)-glutamine methyltransferase low > 89
Serratia liquefaciens MT49 0.52 IAI46_19570 SoxR-reducing system protein RseC 0.84 IAI46_18030 50S ribosomal protein L3 N(5)-glutamine methyltransferase low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.85 LU632_RS07770 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase — —
Pectobacterium carotovorum WPP14 0.45 HER17_RS05795 SoxR-reducing system protein RseC 0.82 HER17_RS06930 50S ribosomal protein L3 N(5)-glutamine methyltransferase low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.85 DDA3937_RS14585 50S ribosomal protein L3 N(5)-glutamine methyltransferase low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.84 HGI48_RS14535 50S ribosomal protein L3 N(5)-glutamine methyltransferase — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.84 DZA65_RS15470 50S ribosomal protein L3 N(5)-glutamine methyltransferase — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.63 SO3080 hemK family protein (NCBI ptt file) — —
Shewanella loihica PV-4 0.21 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.67 Shew_2417 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) — —
Marinobacter adhaerens HP15 0.20 HP15_778 positive regulator of sigma E, RseC/MucC 0.53 HP15_1839 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.54 Psest_1995 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific — —
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.51 B158DRAFT_1297 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase (EC 2.1.1.-) low > 40
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.57 MIT1002_01228 50S ribosomal protein L3 glutamine methyltransferase low > 70

Not shown: 1 genomes with orthologs for HEPCGN_20540 only; 43 genomes with orthologs for HEPCGN_21815 only