Conservation of cofitness between HEPCGN_20540 and HEPCGN_20255 in Escherichia coli ECOR38

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.0 HEPCGN_20255 rnfH RnfH family protein 0.92 5
Escherichia fergusonii Becca 1.00 EFB2_01326 Protein RseC 0.98 EFB2_01275 Persistence and stress-resistance antitoxin PasI low > 86
Escherichia coli ECOR27 0.99 NOLOHH_13070 rseC SoxR-reducing system protein RseC 0.99 NOLOHH_12805 rnfH RnfH family protein 0.65 27
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01137 Protein RseC 0.98 OHPLBJKB_01089 hypothetical protein low > 73
Escherichia coli BW25113 0.99 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 0.98 b2618 b2618 orf, hypothetical protein (VIMSS) 0.64 7
Escherichia coli ECRC102 0.99 NIAGMN_19165 rseC SoxR-reducing system protein RseC 0.97 NIAGMN_18905 rnfH RnfH family protein — —
Escherichia coli ECRC101 0.99 MCAODC_11925 rseC SoxR-reducing system protein RseC 0.97 MCAODC_11660 rnfH RnfH family protein low > 87
Escherichia coli ECRC62 0.99 BNILDI_11870 rseC SoxR-reducing system protein RseC 0.99 BNILDI_11610 rnfH RnfH family protein low > 75
Escherichia coli ECRC100 0.99 OKFHMN_21395 rseC SoxR-reducing system protein RseC 0.97 OKFHMN_21135 rnfH RnfH family protein low > 80
Escherichia coli ECRC99 0.99 KEDOAH_06830 rseC SoxR-reducing system protein RseC 0.97 KEDOAH_07085 rnfH RnfH family protein — —
Escherichia coli ECRC98 0.99 JDDGAC_25060 rseC SoxR-reducing system protein RseC 0.97 JDDGAC_24800 rnfH RnfH family protein low > 86
Escherichia coli BL21 0.99 ECD_02464 SoxR iron-sulfur cluster reduction factor component 0.98 ECD_02506 UPF0125 family protein 0.73 11
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 0.98 ECOLIN_RS14785 RnfH family protein 0.69 9
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.85 GFF4160 UPF0125 protein yfjF 0.77 15
Klebsiella michiganensis M5al 0.78 BWI76_RS21340 SoxR reducing system protein RseC 0.82 BWI76_RS21570 RnfH family protein 0.30 34
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.82 EX28DRAFT_2721 Uncharacterized protein conserved in bacteria 0.65 69
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.82 MPMX20_03488 Persistence and stress-resistance antitoxin PasI low > 85
Pantoea sp. MT58 0.62 IAI47_04865 SoxR-reducing system protein RseC 0.69 IAI47_04800 RnfH family protein 0.34 24
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.72 EX31_RS21750 RnfH family protein 0.67 73
Serratia liquefaciens MT49 0.52 IAI46_19570 SoxR-reducing system protein RseC 0.74 IAI46_19645 RnfH family protein low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.71 LU632_RS17015 RnfH family protein — —
Pectobacterium carotovorum WPP14 0.45 HER17_RS05795 SoxR-reducing system protein RseC 0.73 HER17_RS17430 RnfH family protein low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.74 DDA3937_RS04315 RnfH family protein low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.72 HGI48_RS04310 RnfH family protein — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.72 DZA65_RS04225 RnfH family protein — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.40 SO1475 conserved hypothetical protein (NCBI ptt file) — —
Shewanella loihica PV-4 0.21 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.47 Shew_1270 hypothetical protein (RefSeq) — —
Marinobacter adhaerens HP15 0.20 HP15_778 positive regulator of sigma E, RseC/MucC 0.33 HP15_3087 protein belonging to uncharacterized protein family UPF0125 — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.41 Psest_0959 Uncharacterized protein conserved in bacteria — —
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.63 B158DRAFT_0971 Uncharacterized protein conserved in bacteria — —
Magnetospirillum magneticum AMB-1 0.16 AMB_RS13145 positive regulator of sigma E activity 0.40 AMB_RS13180 protein rnfH 0.72 38

Not shown: 1 genomes with orthologs for HEPCGN_20540 only; 29 genomes with orthologs for HEPCGN_20255 only