Conservation of cofitness between HEPCGN_04800 and HEPCGN_19360 in Escherichia coli ECOR38

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04800 yobA CopC domain-containing protein YobA 1.0 HEPCGN_19360 csdA cysteine desulfurase CsdA 0.54 15
Escherichia coli BW25113 0.99 b1841 yobA hypothetical protein (NCBI) 0.99 b2810 csdA cysteine sulfinate desulfinase (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS10250 CopC domain-containing protein YobA 0.98 ECOLIN_RS15660 cysteine desulfurase CsdA — —
Escherichia fergusonii Becca 0.99 EFB2_02103 Protein YobA 0.98 EFB2_01107 Cysteine desulfurase CsdA low > 86
Escherichia coli BL21 0.99 ECD_01812 CopC family protein 0.99 ECD_02661 cysteine sulfinate desulfinase low > 61
Escherichia coli ECRC99 0.98 KEDOAH_01705 yobA CopC domain-containing protein YobA 0.99 KEDOAH_08025 csdA cysteine desulfurase CsdA — —
Escherichia coli ECRC98 0.98 JDDGAC_00975 yobA CopC domain-containing protein YobA 0.99 JDDGAC_23770 csdA cysteine desulfurase CsdA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_01890 Protein YobA 0.99 OHPLBJKB_00921 Cysteine desulfurase CsdA low > 73
Escherichia coli ECRC100 0.98 OKFHMN_26400 yobA CopC domain-containing protein YobA 0.99 OKFHMN_20105 csdA cysteine desulfurase CsdA low > 80
Escherichia coli ECRC101 0.98 MCAODC_19005 yobA CopC domain-containing protein YobA 0.99 MCAODC_10630 csdA cysteine desulfurase CsdA low > 87
Escherichia coli ECRC102 0.98 NIAGMN_01660 yobA CopC domain-containing protein YobA 0.99 NIAGMN_17875 csdA cysteine desulfurase CsdA — —
Escherichia coli ECOR27 0.98 NOLOHH_16910 yobA CopC domain-containing protein YobA 0.99 NOLOHH_11985 csdA cysteine desulfurase CsdA low > 75
Escherichia coli ECRC62 0.98 BNILDI_15705 yobA CopC domain-containing protein YobA 1.00 BNILDI_10490 csdA cysteine desulfurase CsdA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF1620 Copper resistance protein CopC 0.87 GFF4867 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA low > 78
Enterobacter asburiae PDN3 0.56 EX28DRAFT_0713 Uncharacterized protein, homolog of Cu resistance protein CopC 0.85 EX28DRAFT_2886 cysteine desulfurase, catalytic subunit CsdA low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_02748 Protein YobA 0.84 MPMX20_03673 Cysteine desulfurase CsdA low > 85
Klebsiella michiganensis M5al 0.51 BWI76_RS18060 hypothetical protein 0.81 BWI76_RS22965 cysteine sulfinate desulfinase low > 92
Serratia liquefaciens MT49 0.45 IAI46_10005 CopC domain-containing protein YobA 0.71 IAI46_20350 cysteine desulfurase CsdA — —
Erwinia tracheiphila SCR3 0.45 LU632_RS13300 yobA CopC domain-containing protein YobA 0.69 LU632_RS06240 csdA cysteine desulfurase CsdA low > 74
Rahnella sp. WP5 0.39 EX31_RS24770 copper homeostasis periplasmic binding protein CopC 0.67 EX31_RS13120 cysteine desulfurase CsdA low > 89
Dickeya dadantii 3937 0.33 DDA3937_RS10160 copper homeostasis periplasmic binding protein CopC 0.66 DDA3937_RS05040 cysteine desulfurase CsdA low > 74
Dickeya dianthicola ME23 0.32 DZA65_RS10605 copper homeostasis periplasmic binding protein CopC 0.65 DZA65_RS05385 cysteine desulfurase CsdA — —
Dickeya dianthicola 67-19 0.31 HGI48_RS10190 copper homeostasis periplasmic binding protein CopC 0.66 HGI48_RS05045 cysteine desulfurase CsdA low > 71
Pseudomonas simiae WCS417 0.30 PS417_17345 hypothetical protein 0.37 PS417_06175 cysteine sulfinate desulfinase low > 88
Pseudomonas fluorescens SBW25 0.29 PFLU_RS19270 copper homeostasis periplasmic binding protein CopC 0.37 PFLU_RS06240 cysteine desulfurase low > 109
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS19270 copper homeostasis periplasmic binding protein CopC 0.37 PFLU_RS06240 cysteine desulfurase low > 109
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_1495 Copper resistance protein CopC 0.37 Psyr_1335 Aminotransferase, class V low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_1495 Copper resistance protein CopC 0.37 Psyr_1335 Aminotransferase, class V low > 86
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_3976 Copper resistance protein C precursor 0.37 PfGW456L13_4717 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA low > 87
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_46 Copper resistance protein C precursor 0.38 Pf1N1B4_3076 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA low > 87
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_5550 Copper resistance protein C precursor 0.36 Pf6N2E2_3079 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA low > 103
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_18130 copper resistance protein CopC 0.36 AO356_06075 cysteine sulfinate desulfinase low > 104

Not shown: 16 genomes with orthologs for HEPCGN_04800 only; 6 genomes with orthologs for HEPCGN_19360 only