Conservation of cofitness between HEPCGN_20540 and HEPCGN_17680 in Escherichia coli ECOR38

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.0 HEPCGN_17680 tolC outer membrane channel protein TolC 0.90 18
Escherichia fergusonii Becca 1.00 EFB2_01326 Protein RseC 0.99 EFB2_00773 Outer membrane protein TolC low > 86
Escherichia coli ECOR27 0.99 NOLOHH_13070 rseC SoxR-reducing system protein RseC 1.00 NOLOHH_10610 tolC outer membrane channel protein TolC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_00668 Outer membrane protein TolC low > 73
Escherichia coli BW25113 0.99 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b3035 tolC outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) low > 76
Escherichia coli ECRC101 0.99 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_09320 tolC outer membrane channel protein TolC 0.80 2
Escherichia coli ECRC99 0.99 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_09340 tolC outer membrane channel protein TolC — —
Escherichia coli ECRC62 0.99 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.00 BNILDI_00905 tolC outer membrane channel protein TolC low > 75
Escherichia coli ECRC98 0.99 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.00 JDDGAC_22440 tolC outer membrane channel protein TolC 0.85 80
Escherichia coli BL21 0.99 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_02907 transport channel low > 61
Escherichia coli ECRC100 0.99 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_18805 tolC outer membrane channel protein TolC low > 80
Escherichia coli ECRC102 0.99 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_16570 tolC outer membrane channel protein TolC — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 1.00 ECOLIN_RS17515 outer membrane channel protein TolC low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.89 GFF3149 Type I secretion outer membrane protein, TolC precursor low > 78
Klebsiella michiganensis M5al 0.78 BWI76_RS21340 SoxR reducing system protein RseC 0.81 BWI76_RS24400 outer membrane channel protein TolC low > 92
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.85 EX28DRAFT_3073 type I secretion outer membrane protein, TolC family low > 76
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.84 MPMX20_03882 Outer membrane protein TolC low > 85
Pantoea sp. MT58 0.62 IAI47_04865 SoxR-reducing system protein RseC 0.72 IAI47_03135 outer membrane channel protein TolC low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.78 EX31_RS08100 outer membrane channel protein TolC low > 89
Serratia liquefaciens MT49 0.52 IAI46_19570 SoxR-reducing system protein RseC 0.70 IAI46_21945 outer membrane channel protein TolC low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.73 LU632_RS20635 tolC outer membrane channel protein TolC — —
Pectobacterium carotovorum WPP14 0.45 HER17_RS05795 SoxR-reducing system protein RseC 0.69 HER17_RS19825 outer membrane channel protein TolC low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.68 DDA3937_RS01740 outer membrane channel protein TolC low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.68 HGI48_RS01635 outer membrane channel protein TolC — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.68 DZA65_RS01710 outer membrane channel protein TolC — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.34 SO3904 tolC outer membrane protein TolC (NCBI ptt file) — —
Shewanella loihica PV-4 0.21 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.33 Shew_0544 tolC outer membrane channel protein (RefSeq) — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.23 Psest_0476 type I secretion outer membrane protein, TolC family — —
Marinobacter adhaerens HP15 0.20 HP15_778 positive regulator of sigma E, RseC/MucC 0.24 HP15_451 type I secretion outer membrane protein, TolC family — —
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.25 B158DRAFT_0973 type I secretion outer membrane protein, TolC family low > 40
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.35 MIT1002_00670 Outer membrane protein TolC precursor low > 70

Not shown: 1 genomes with orthologs for HEPCGN_20540 only; 47 genomes with orthologs for HEPCGN_17680 only