Conservation of cofitness between HEPCGN_05285 and HEPCGN_14475 in Escherichia coli ECOR38

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_05285 astB N-succinylarginine dihydrolase 1.0 HEPCGN_14475 rfaQ lipopolysaccharide core heptosyltransferase RfaQ 0.69 19
Escherichia coli BW25113 0.98 b1745 astB succinylarginine dihydrolase (NCBI) 0.71 b3632 rfaQ lipopolysaccharide core biosynthesis protein (NCBI) low > 76
Escherichia coli ECRC100 0.98 OKFHMN_26920 astB N-succinylarginine dihydrolase 0.99 OKFHMN_15650 rfaQ lipopolysaccharide core heptosyltransferase RfaQ low > 80
Escherichia coli BL21 0.98 ECD_01714 succinylarginine dihydrolase 0.99 ECD_03489 lipopolysaccharide core biosynthesis protein — —
Escherichia coli ECRC101 0.98 MCAODC_18490 astB N-succinylarginine dihydrolase 0.99 MCAODC_06160 rfaQ lipopolysaccharide core heptosyltransferase RfaQ low > 87
Escherichia coli ECRC98 0.98 JDDGAC_01495 astB N-succinylarginine dihydrolase 0.99 JDDGAC_19275 rfaQ lipopolysaccharide core heptosyltransferase RfaQ low > 86
Escherichia coli ECRC99 0.98 KEDOAH_01190 astB N-succinylarginine dihydrolase 0.99 KEDOAH_12500 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli ECRC102 0.98 NIAGMN_01145 astB N-succinylarginine dihydrolase 0.99 NIAGMN_13410 rfaQ lipopolysaccharide core heptosyltransferase RfaQ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_01987 N-succinylarginine dihydrolase 0.99 OHPLBJKB_00070 Lipopolysaccharide core heptosyltransferase RfaQ low > 73
Escherichia coli ECOR27 0.97 NOLOHH_17435 astB N-succinylarginine dihydrolase 0.99 NOLOHH_07530 rfaQ lipopolysaccharide core heptosyltransferase RfaQ low > 75
Escherichia coli ECRC62 0.97 BNILDI_16220 astB N-succinylarginine dihydrolase 0.99 BNILDI_03985 rfaQ lipopolysaccharide core heptosyltransferase RfaQ low > 75
Escherichia coli Nissle 1917 0.95 ECOLIN_RS09730 N-succinylarginine dihydrolase 0.99 ECOLIN_RS20700 lipopolysaccharide core heptosyltransferase RfaQ low > 55
Escherichia fergusonii Becca 0.95 EFB2_02248 N-succinylarginine dihydrolase 1.00 EFB2_00181 Lipopolysaccharide core heptosyltransferase RfaQ low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3495 Succinylarginine dihydrolase (EC 3.5.3.23) 0.67 GFF379 Lipopolysaccharide heptosyltransferase III (EC 2.4.1.-) low > 78
Enterobacter asburiae PDN3 0.78 EX28DRAFT_1749 succinylarginine dihydrolase (EC 3.5.3.23) 0.40 EX28DRAFT_3878 lipopolysaccharide heptosyltransferase III, putative low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_01868 N-succinylarginine dihydrolase 0.41 MPMX20_00107 Lipopolysaccharide core heptosyltransferase RfaQ low > 85
Klebsiella michiganensis M5al 0.74 BWI76_RS11685 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.39 BWI76_RS27295 putative lipopolysaccharide heptosyltransferase III — —
Pantoea sp. MT58 0.71 IAI47_11080 N-succinylarginine dihydrolase 0.40 IAI47_00660 putative lipopolysaccharide heptosyltransferase III low > 76
Serratia liquefaciens MT49 0.68 IAI46_15320 N-succinylarginine dihydrolase 0.43 IAI46_24775 putative lipopolysaccharide heptosyltransferase III low > 86
Rahnella sp. WP5 0.60 EX31_RS17395 N-succinylarginine dihydrolase 0.42 EX31_RS14430 putative lipopolysaccharide heptosyltransferase III low > 89
Shewanella amazonensis SB2B 0.55 Sama_1321 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.12 Sama_0102 glycosyl transferase family protein (RefSeq) — —
Shewanella loihica PV-4 0.53 Shew_2225 succinylarginine dihydrolase (RefSeq) 0.12 Shew_3702 glycosyl transferase family protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.53 Shewana3_1728 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.13 Shewana3_4100 glycosyl transferase family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.52 SO2706 astB Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.12 SO4678 heptosyl transferase, glycosyltransferase family 9 protein (NCBI ptt file) low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS02840 N-succinylarginine dihydrolase 0.09 A4249_RS11125 glycosyltransferase family 9 protein low > 48

Not shown: 24 genomes with orthologs for HEPCGN_05285 only; 22 genomes with orthologs for HEPCGN_14475 only