Conservation of cofitness between HEPCGN_05290 and HEPCGN_14380 in Escherichia coli ECOR38

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_05290 astE succinylglutamate desuccinylase 1.0 HEPCGN_14380 rpoZ DNA-directed RNA polymerase subunit omega 0.61 4
Escherichia fergusonii Becca 1.00 EFB2_02249 Succinylglutamate desuccinylase 1.00 EFB2_00139 DNA-directed RNA polymerase subunit omega low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09725 succinylglutamate desuccinylase 1.00 ECOLIN_RS20785 DNA-directed RNA polymerase subunit omega — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01988 Succinylglutamate desuccinylase 1.00 OHPLBJKB_00052 DNA-directed RNA polymerase subunit omega low > 73
Escherichia coli BW25113 0.99 b1744 astE succinylglutamate desuccinylase (NCBI) 1.00 b3649 rpoZ DNA-directed RNA polymerase subunit omega (NCBI) low > 76
Escherichia coli BL21 0.99 ECD_01713 succinylglutamate desuccinylase 1.00 ECD_03506 RNA polymerase, omega subunit low > 61
Escherichia coli ECOR27 0.99 NOLOHH_17440 astE succinylglutamate desuccinylase 1.00 NOLOHH_07440 rpoZ DNA-directed RNA polymerase subunit omega low > 75
Escherichia coli ECRC101 0.99 MCAODC_18485 astE succinylglutamate desuccinylase 1.00 MCAODC_06070 rpoZ DNA-directed RNA polymerase subunit omega low > 87
Escherichia coli ECRC98 0.99 JDDGAC_01500 astE succinylglutamate desuccinylase 1.00 JDDGAC_19185 rpoZ DNA-directed RNA polymerase subunit omega low > 86
Escherichia coli ECRC99 0.99 KEDOAH_01185 astE succinylglutamate desuccinylase 1.00 KEDOAH_12585 rpoZ DNA-directed RNA polymerase subunit omega — —
Escherichia coli ECRC100 0.99 OKFHMN_26925 astE succinylglutamate desuccinylase 1.00 OKFHMN_15560 rpoZ DNA-directed RNA polymerase subunit omega — —
Escherichia coli ECRC102 0.99 NIAGMN_01140 astE succinylglutamate desuccinylase 1.00 NIAGMN_13320 rpoZ DNA-directed RNA polymerase subunit omega — —
Escherichia coli ECRC62 0.99 BNILDI_16225 astE succinylglutamate desuccinylase 1.00 BNILDI_04075 rpoZ DNA-directed RNA polymerase subunit omega low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF3496 Succinylglutamate desuccinylase (EC 3.5.1.96) 1.00 GFF358 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) — —
Enterobacter asburiae PDN3 0.60 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96) 1.00 EX28DRAFT_3898 DNA-directed RNA polymerase subunit omega (EC 2.7.7.6) — —
Klebsiella michiganensis M5al 0.60 BWI76_RS11690 succinylglutamate desuccinylase 0.99 BWI76_RS27425 DNA-directed RNA polymerase subunit omega low > 92
Enterobacter sp. TBS_079 0.59 MPMX20_01869 Succinylglutamate desuccinylase 1.00 MPMX20_00087 DNA-directed RNA polymerase subunit omega low > 85
Pantoea sp. MT58 0.57 IAI47_11075 succinylglutamate desuccinylase 0.81 IAI47_00515 DNA-directed RNA polymerase subunit omega low > 76
Serratia liquefaciens MT49 0.47 IAI46_15315 succinylglutamate desuccinylase 0.77 IAI46_24890 DNA-directed RNA polymerase subunit omega — —
Rahnella sp. WP5 0.44 EX31_RS17390 succinylglutamate desuccinylase 0.78 EX31_RS15805 DNA-directed RNA polymerase subunit omega low > 89
Acinetobacter radioresistens SK82 0.41 MPMX26_02247 Succinylglutamate desuccinylase 0.43 MPMX26_02795 DNA-directed RNA polymerase subunit omega low > 36
Shewanella amazonensis SB2B 0.28 Sama_1708 succinylglutamate desuccinylase (RefSeq) 0.59 Sama_0265 rpoZ DNA-directed RNA polymerase subunit omega (RefSeq) — —
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_1551 succinylglutamate desuccinylase (EC 3.5.1.96) 0.54 B158DRAFT_0575 DNA-directed RNA polymerase subunit omega (EC 2.7.7.6) — —
Shewanella oneidensis MR-1 0.28 SO2338 astE succinylglutamate desuccinylase (NCBI ptt file) 0.59 SO0360 rpoZ DNA-directed RNA polymerase, omega subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.27 Shewana3_2132 succinylglutamate desuccinylase (RefSeq) 0.59 Shewana3_3811 rpoZ DNA-directed RNA polymerase subunit omega (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_06280 succinylglutamate desuccinylase 0.66 CSW01_13670 DNA-directed RNA polymerase subunit omega low > 62

Not shown: 20 genomes with orthologs for HEPCGN_05290 only; 7 genomes with orthologs for HEPCGN_14380 only