Conservation of cofitness between PS417_18295 and PS417_04525 in Pseudomonas simiae WCS417

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_18295 histidine kinase 1.0 PS417_04525 16S rRNA methyltransferase 0.18 6
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS20145 sensor histidine kinase efflux regulator BaeS 0.98 PFLU_RS04570 class I SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens SBW25 0.97 PFLU_RS20145 sensor histidine kinase efflux regulator BaeS 0.98 PFLU_RS04570 class I SAM-dependent methyltransferase low > 109
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_00705 histidine kinase 0.90 AO356_06940 16S rRNA methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_220 Sensory histidine kinase BaeS 0.90 Pf6N2E2_3247 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_2867 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal 0.81 Psyr_0986 16S rRNA m(2)G 1207 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_2867 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal 0.81 Psyr_0986 16S rRNA m(2)G 1207 methyltransferase low > 86
Pectobacterium carotovorum WPP14 0.45 HER17_RS06305 two-component system sensor histidine kinase BaeS 0.25 HER17_RS18080 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 75
Serratia liquefaciens MT49 0.43 IAI46_18990 two-component system sensor histidine kinase BaeS 0.28 IAI46_02860 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 86
Rahnella sp. WP5 0.42 EX31_RS20310 two-component system sensor histidine kinase BaeS 0.26 EX31_RS04120 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 89
Dickeya dianthicola ME23 0.42 DZA65_RS16180 two-component system sensor histidine kinase BaeS 0.26 DZA65_RS03385 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 75
Dickeya dianthicola 67-19 0.42 HGI48_RS15360 two-component system sensor histidine kinase BaeS 0.26 HGI48_RS03340 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 71
Dickeya dadantii 3937 0.42 DDA3937_RS15280 two-component system sensor histidine kinase BaeS 0.27 DDA3937_RS03190 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 74
Pantoea sp. MT58 0.41 IAI47_06855 two-component system sensor histidine kinase BaeS 0.28 IAI47_16375 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 76
Escherichia coli ECOR38 0.41 HEPCGN_02870 baeS two-component system sensor histidine kinase BaeS 0.27 HEPCGN_09305 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 87
Erwinia tracheiphila SCR3 0.41 LU632_RS08675 baeS two-component system sensor histidine kinase BaeS 0.29 LU632_RS03750 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 74
Escherichia fergusonii Becca 0.41 EFB2_01777 Signal transduction histidine-protein kinase BaeS 0.27 EFB2_04076 Ribosomal RNA small subunit methyltransferase C low > 86
Escherichia coli Nissle 1917 0.41 ECOLIN_RS12215 two-component system sensor histidine kinase BaeS 0.28 ECOLIN_RS25090 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC — —
Enterobacter sp. TBS_079 0.40 MPMX20_03064 Signal transduction histidine-protein kinase BaeS 0.27 MPMX20_00669 Ribosomal RNA small subunit methyltransferase C low > 85
Escherichia coli ECRC98 0.40 JDDGAC_28290 baeS two-component system sensor histidine kinase BaeS 0.27 JDDGAC_14895 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 86
Escherichia coli ECRC101 0.40 MCAODC_20760 baeS two-component system sensor histidine kinase BaeS 0.27 MCAODC_01815 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 87
Escherichia coli ECRC102 0.40 NIAGMN_22125 baeS two-component system sensor histidine kinase BaeS 0.27 NIAGMN_09150 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC — —
Escherichia coli ECRC100 0.40 OKFHMN_24180 baeS two-component system sensor histidine kinase BaeS 0.27 OKFHMN_11300 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 80
Escherichia coli ECRC99 0.40 KEDOAH_03970 baeS two-component system sensor histidine kinase BaeS 0.27 KEDOAH_16845 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_0480 Signal transduction histidine kinase 0.27 EX28DRAFT_3579 16S RNA G1207 methylase RsmC low > 76
Escherichia coli BL21 0.40 ECD_01983 sensory histidine kinase in two-component regulatory system with BaeR 0.28 ECD_04246 16S rRNA m(2)G1207 methyltransferase, SAM-dependent low > 61
Escherichia coli ECRC62 0.40 BNILDI_14440 baeS two-component system sensor histidine kinase BaeS 0.27 BNILDI_07980 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 75
Escherichia coli ECOR27 0.40 NOLOHH_15525 baeS two-component system sensor histidine kinase BaeS 0.27 NOLOHH_03620 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC low > 75
Escherichia coli BW25113 0.40 b2078 baeS sensory histidine kinase in two-component regulatory system with BaeR (NCBI) 0.28 b4371 rsmC 16S ribosomal RNA m2G1207 methyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01626 Signal transduction histidine-protein kinase BaeS 0.27 OHPLBJKB_03691 Ribosomal RNA small subunit methyltransferase C low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF3851 Sensory histidine kinase BaeS 0.28 GFF1031 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) low > 78
Klebsiella michiganensis M5al 0.39 BWI76_RS19270 two-component sensor histidine kinase 0.27 BWI76_RS04080 16S rRNA (guanine(1207)-N(2))-methyltransferase low > 92
Acinetobacter radioresistens SK82 0.24 MPMX26_02626 Sensor histidine kinase RcsC 0.45 MPMX26_02491 Ribosomal RNA small subunit methyltransferase C low > 36

Not shown: 11 genomes with orthologs for PS417_18295 only; 13 genomes with orthologs for PS417_04525 only