Conservation of cofitness between PS417_06325 and PS417_00440 in Pseudomonas simiae WCS417

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_06325 LysR family transcriptional regulator 1.0 PS417_00440 N-acetylmuramoyl-L-alanine amidase 0.49 7
Pseudomonas fluorescens SBW25 0.98 PFLU_RS06390 LysR family transcriptional regulator 0.95 PFLU_RS00430 N-acetylmuramoyl-L-alanine amidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS06390 LysR family transcriptional regulator 0.95 PFLU_RS00430 N-acetylmuramoyl-L-alanine amidase low > 109
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3045 Transcriptional regulator, LysR family, in formaldehyde detoxification operon 0.79 Pf6N2E2_4155 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) low > 103
Pseudomonas sp. RS175 0.95 PFR28_00419 HTH-type transcriptional regulator DmlR 0.80 PFR28_04631 N-acetylmuramoyl-L-alanine amidase AmiD low > 88
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_3107 Transcriptional regulator, LysR family, in formaldehyde detoxification operon 0.79 Pf1N1B4_1882 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) low > 87
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_05925 LysR family transcriptional regulator 0.78 AO356_11430 N-acetylmuramoyl-L-alanine amidase low > 104
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_4683 Transcriptional regulator, LysR family, in formaldehyde detoxification operon 0.78 PfGW456L13_587 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_16575 LysR family transcriptional regulator 0.81 AO353_10965 N-acetylmuramoyl-L-alanine amidase low > 101
Pseudomonas putida KT2440 0.89 PP_1615 Transcriptional regulator, LysR family 0.74 PP_0130 1,6-anhydro-N-acetylmuramyl-L-alanine amidase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_1366 transcriptional regulator, LysR family 0.77 Psyr_0265 N-acetylmuramoyl-L-alanine amidase, family 2 low > 86
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_1366 transcriptional regulator, LysR family 0.77 Psyr_0265 N-acetylmuramoyl-L-alanine amidase, family 2 low > 86
Pseudomonas sp. S08-1 0.80 OH686_18145 Transcriptional regulator, LysR family, in formaldehyde detoxification operon 0.60 OH686_12170 N-acetylmuramoyl-L-alanine amidase or 1,6-anhydro-N-acetylmuramyl-L-alanine amidase low > 80
Pseudomonas stutzeri RCH2 0.71 Psest_2817 Transcriptional regulator 0.62 Psest_0189 Negative regulator of beta-lactamase expression low > 67
Azospirillum brasilense Sp245 0.67 AZOBR_RS16520 LysR family transcriptional regulator 0.28 AZOBR_RS12270 N-acetylmuramoyl-L-alanine amidase low > 97
Azospirillum sp. SherDot2 0.57 MPMX19_05327 HTH-type transcriptional regulator PgrR 0.25 MPMX19_01668 N-acetylmuramoyl-L-alanine amidase AmiD — —
Caulobacter crescentus NA1000 0.54 CCNA_02602 LysR-family transcriptional regulator 0.30 CCNA_02650 N-acetyl-anhydromuramyl-L-alanine amidase low > 66
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_02602 LysR-family transcriptional regulator 0.30 CCNA_02650 N-acetyl-anhydromuramyl-L-alanine amidase low > 67

Not shown: 10 genomes with orthologs for PS417_06325 only; 6 genomes with orthologs for PS417_00440 only