Conservation of cofitness between GFF2657 and GFF4203 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2657 Universal stress protein E 1.0 GFF4203 Thiazole biosynthesis protein ThiH 0.37 18
Escherichia coli ECRC62 0.97 BNILDI_18095 uspE universal stress protein UspE 0.91 BNILDI_05980 thiH 2-iminoacetate synthase ThiH low > 75
Escherichia coli BL21 0.97 ECD_01310 stress-induced protein 0.90 ECD_03866 tyrosine lyase, involved in thiamine-thiazole moiety synthesis low > 61
Escherichia coli ECRC100 0.97 OKFHMN_02245 uspE universal stress protein UspE 0.91 OKFHMN_13400 thiH 2-iminoacetate synthase ThiH low > 80
Escherichia coli ECOR27 0.97 NOLOHH_19945 uspE universal stress protein UspE 0.91 NOLOHH_05545 thiH 2-iminoacetate synthase ThiH
Escherichia coli ECRC98 0.97 JDDGAC_04790 uspE universal stress protein UspE 0.91 JDDGAC_17025 thiH 2-iminoacetate synthase ThiH low > 86
Escherichia coli ECOR38 0.97 HEPCGN_25920 uspE universal stress protein UspE 0.91 HEPCGN_12035 thiH 2-iminoacetate synthase ThiH low > 87
Escherichia coli ECRC102 0.97 NIAGMN_26415 uspE universal stress protein UspE 0.91 NIAGMN_11150 thiH 2-iminoacetate synthase ThiH
Escherichia coli BW25113 0.97 b1333 uspE stress-induced protein (NCBI) 0.91 b3990 thiH thiamine biosynthesis protein ThiH (NCBI) low > 76
Escherichia fergusonii Becca 0.97 EFB2_02594 Universal stress protein E 0.90 EFB2_04622 2-iminoacetate synthase low > 86
Escherichia coli Nissle 1917 0.97 ECOLIN_RS08000 universal stress protein UspE 0.90 ECOLIN_RS23015 2-iminoacetate synthase ThiH
Escherichia coli ECRC101 0.97 MCAODC_16025 uspE universal stress protein UspE 0.91 MCAODC_03900 thiH 2-iminoacetate synthase ThiH low > 87
Escherichia coli ECRC99 0.97 KEDOAH_26525 uspE universal stress protein UspE 0.91 KEDOAH_14760 thiH 2-iminoacetate synthase ThiH
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_02349 Universal stress protein E 0.91 OHPLBJKB_04061 2-iminoacetate synthase low > 73
Enterobacter sp. TBS_079 0.96 MPMX20_02033 Universal stress protein E 0.90 MPMX20_00212 2-iminoacetate synthase 0.28 47
Enterobacter asburiae PDN3 0.96 EX28DRAFT_1542 Universal stress protein UspA and related nucleotide-binding proteins 0.89 EX28DRAFT_4531 thiazole biosynthesis protein ThiH low > 76
Klebsiella michiganensis M5al 0.93 BWI76_RS16190 universal stress protein UspE 0.90 BWI76_RS01530 2-iminoacetate synthase ThiH low > 92
Serratia liquefaciens MT49 0.85 IAI46_13265 universal stress protein UspE 0.80 IAI46_01295 2-iminoacetate synthase ThiH low > 86
Rahnella sp. WP5 0.85 EX31_RS07205 universal stress protein UspE 0.77 EX31_RS16790 2-iminoacetate synthase ThiH low > 89
Pectobacterium carotovorum WPP14 0.85 HER17_RS10520 universal stress protein UspE 0.81 HER17_RS20405 2-iminoacetate synthase ThiH low > 75
Dickeya dadantii 3937 0.84 DDA3937_RS10955 universal stress protein UspE 0.80 DDA3937_RS01150 2-iminoacetate synthase ThiH 0.46 61
Erwinia tracheiphila SCR3 0.84 LU632_RS11425 uspE universal stress protein UspE 0.77 LU632_RS00945 thiH 2-iminoacetate synthase ThiH low > 74
Dickeya dianthicola ME23 0.83 DZA65_RS11365 universal stress protein UspE 0.80 DZA65_RS01190 2-iminoacetate synthase ThiH 0.52 11
Dickeya dianthicola 67-19 0.83 HGI48_RS10905 universal stress protein UspE 0.80 HGI48_RS01145 2-iminoacetate synthase ThiH low > 71
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_07185 universal stress protein UspE 0.63 CSW01_00360 2-iminoacetate synthase ThiH low > 62
Shewanella oneidensis MR-1 0.55 SO2355 universal stress protein family (NCBI ptt file) 0.53 SO2440 thiH thiH protein (NCBI ptt file)
Shewanella amazonensis SB2B 0.55 Sama_1800 universal stress protein UspE (RefSeq) 0.53 Sama_1855 thiH thiamine biosynthesis protein ThiH (RefSeq) low > 62
Shewanella sp. ANA-3 0.55 Shewana3_2116 universal stress protein UspE (RefSeq) 0.53 Shewana3_1941 thiH thiamine biosynthesis protein ThiH (RefSeq)
Shewanella loihica PV-4 0.54 Shew_1994 universal stress protein UspE (RefSeq) 0.51 Shew_2091 thiH thiamine biosynthesis protein ThiH (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.46 MIT1002_02138 Universal stress protein E 0.54 MIT1002_00092 2-iminoacetate synthase low > 70

Not shown: 14 genomes with orthologs for GFF2657 only; 11 genomes with orthologs for GFF4203 only