Conservation of cofitness between PS417_26240 and PS417_20920 in Pseudomonas simiae WCS417

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26240 N-methylproline demethylase 1.0 PS417_20920 D-alanyl-D-alanine carboxypeptidase 0.34 12
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_13905 N-methylproline demethylase 0.85 AO356_02595 D-alanyl-D-alanine carboxypeptidase low > 104
Pseudomonas fluorescens FW300-N2E2 0.99 Pf6N2E2_4702 DgcA Dimethylglycine demethylase subunit A 0.85 Pf6N2E2_2344 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 103
Pseudomonas fluorescens SBW25 0.98 PFLU_RS27885 dimethylglycine demethylation protein DgcA 0.95 PFLU_RS22535 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS27885 dimethylglycine demethylation protein DgcA 0.95 PFLU_RS22535 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 109
Pseudomonas sp. RS175 0.98 PFR28_04147 putative N-methylproline demethylase 0.85 PFR28_01057 D-alanyl-D-alanine carboxypeptidase DacC low > 88
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1103 DgcA Dimethylglycine demethylase subunit A 0.84 PfGW456L13_4091 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_4782 NADH:flavin oxidoreductase/NADH oxidase 0.81 Psyr_2111 Peptidase S13, D-Ala-D-Ala carboxypeptidase C low > 86
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_4782 NADH:flavin oxidoreductase/NADH oxidase 0.81 Psyr_2111 Peptidase S13, D-Ala-D-Ala carboxypeptidase C low > 86
Pseudomonas putida KT2440 0.94 PP_0310 putative dimethylglycine dehydrogenase subunit 0.77 PP_2098 D-alanyl-D-alanine carboxypeptidase low > 96
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_2439 DgcA Dimethylglycine demethylase subunit A 0.78 Pf1N1B4_3846 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 87
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_07710 DgcA Dimethylglycine demethylase subunit A (from data) 0.84 AO353_00765 D-alanyl-D-alanine carboxypeptidase low > 101
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_02471 2,4-dienoyl-CoA reductase 0.32 H281DRAFT_04181 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) low > 103
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS08325 NADH:flavin oxidoreductase 0.34 QEN71_RS02470 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 153
Ralstonia solanacearum GMI1000 0.64 RS_RS17475 FAD-dependent oxidoreductase 0.33 RS_RS02925 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF3857 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) 0.26 GFF2768 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 90
Ralstonia solanacearum PSI07 0.11 RPSI07_RS02575 FAD-binding protein 0.33 RPSI07_RS21110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 81
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS20290 stachydrine utilization oxidoreductase protein 0.33 RALBFv3_RS12220 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase low > 76
Ralstonia solanacearum UW163 0.11 UW163_RS18885 stachydrine utilization oxidoreductase protein 0.33 UW163_RS01390 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase — —

Not shown: 3 genomes with orthologs for PS417_26240 only; 11 genomes with orthologs for PS417_20920 only