Conservation of cofitness between GFF319 and GFF4000 in Variovorax sp. SCN45

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF319 EXTRACYTOPLASMIC FUNCTION ALTERNATIVE SIGMA FACTOR 1.0 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.48 11
Variovorax sp. OAS795 0.66 ABID97_RS16820 DUF1109 domain-containing protein 0.89 ABID97_RS09150 UvrD-helicase domain-containing protein low > 91
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS25500 hypothetical protein 0.59 BPHYT_RS13840 DNA-dependent helicase
Dechlorosoma suillum PS 0.38 Dsui_0154 hypothetical protein 0.54 Dsui_1227 DNA/RNA helicase, superfamily I low > 51
Pseudomonas stutzeri RCH2 0.38 Psest_0113 Uncharacterized protein conserved in bacteria 0.39 Psest_4098 Superfamily I DNA and RNA helicases low > 67
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS20840 DUF1109 domain-containing protein 0.57 QEN71_RS05110 3'-5' exonuclease
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS16190 hypothetical protein 0.55 HSERO_RS02160 DNA-dependent helicase low > 78
Pseudomonas putida KT2440 0.35 PP_0995 conserved membrane protein of unknown function 0.38 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex low > 96
Acidovorax sp. GW101-3H11 0.32 Ac3H11_1828 EXTRACYTOPLASMIC FUNCTION ALTERNATIVE SIGMA FACTOR 0.75 Ac3H11_1660 ATP-dependent DNA helicase UvrD/PcrA
Caulobacter crescentus NA1000 0.32 CCNA_03273 hypothetical protein 0.26 CCNA_01596 DNA helicase II low > 66
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_03273 hypothetical protein 0.26 CCNA_01596 DNA helicase II low > 67
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_01785 hypothetical protein 0.59 H281DRAFT_04469 ATP-dependent DNA helicase UvrD
Rhodopseudomonas palustris CGA009 0.23 TX73_009330 DUF1109 domain-containing protein 0.27 TX73_018165 UvrD-helicase domain-containing protein low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS01095 DUF1109 domain-containing protein 0.27 A4249_RS04960 UvrD-helicase domain-containing protein
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_3637 Uncharacterized protein conserved in bacteria 0.28 Ga0059261_0249 Superfamily I DNA and RNA helicases low > 68
Bosea sp. OAE506 0.19 ABIE41_RS02440 DUF1109 domain-containing protein 0.28 ABIE41_RS12730 UvrD-helicase domain-containing protein low > 77
Agrobacterium fabrum C58 0.18 Atu2267 hypothetical protein 0.26 Atu2057 DNA helicase II low > 89
Rhizobium sp. OAE497 0.17 ABIE40_RS01015 NrsF family protein 0.26 ABIE40_RS11670 UvrD-helicase domain-containing protein low > 107
Azospirillum sp. SherDot2 0.12 MPMX19_04569 Anti-sigma-F factor NrsF 0.27 MPMX19_01610 ATP-dependent DNA helicase PcrA low > 112

Not shown: 0 genomes with orthologs for GFF319 only; 78 genomes with orthologs for GFF4000 only