Conservation of cofitness between GFF2011 and GFF3555 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2011 Putative permease 1.0 GFF3555 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis 0.42 7
Klebsiella michiganensis M5al 0.70 BWI76_RS02345 L-methionine/branched-chain amino acid transporter 0.85 BWI76_RS17045 hypothetical protein low > 92
Escherichia fergusonii Becca 0.69 EFB2_04394 L-methionine/branched-chain amino acid exporter YjeH 0.93 EFB2_02306 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 86
Escherichia coli ECRC101 0.68 MCAODC_02930 yjeH L-methionine/branched-chain amino acid transporter 0.91 MCAODC_18175 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 87
Escherichia coli Nissle 1917 0.68 ECOLIN_RS24055 L-methionine/branched-chain amino acid transporter 0.93 ECOLIN_RS09425 1,4-dihydroxy-2-naphthoyl-CoA hydrolase
Escherichia coli ECRC99 0.68 KEDOAH_15745 yjeH L-methionine/branched-chain amino acid transporter 0.91 KEDOAH_00875 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase
Escherichia coli ECRC98 0.68 JDDGAC_16055 yjeH L-methionine/branched-chain amino acid transporter 0.91 JDDGAC_01810 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 86
Escherichia coli ECRC102 0.68 NIAGMN_10265 yjeH L-methionine/branched-chain amino acid transporter 0.91 NIAGMN_00830 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase
Escherichia coli BL21 0.68 ECD_04011 putative transporter 0.92 ECD_01655 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 61
Escherichia coli ECRC100 0.68 OKFHMN_12420 yjeH L-methionine/branched-chain amino acid transporter 0.91 OKFHMN_27235 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 80
Escherichia coli ECOR38 0.68 HEPCGN_10645 yjeH L-methionine/branched-chain amino acid transporter 0.93 HEPCGN_05620 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 87
Escherichia coli ECRC62 0.68 BNILDI_06805 yjeH L-methionine/branched-chain amino acid transporter 0.92 BNILDI_16545 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 75
Escherichia coli BW25113 0.68 b4141 yjeH predicted transporter (NCBI) 0.92 b1686 ydiI hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03902 L-methionine/branched-chain amino acid exporter YjeH 0.92 OHPLBJKB_02038 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 73
Escherichia coli ECOR27 0.68 NOLOHH_04685 yjeH L-methionine/branched-chain amino acid transporter 0.93 NOLOHH_17755 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 75
Enterobacter sp. TBS_079 0.68 MPMX20_00421 L-methionine/branched-chain amino acid exporter YjeH 0.88 MPMX20_01927 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 85
Enterobacter asburiae PDN3 0.64 EX28DRAFT_3338 Amino acid transporters 0.87 EX28DRAFT_1695 uncharacterized domain 1 low > 76
Serratia liquefaciens MT49 0.62 IAI46_22050 L-methionine/branched-chain amino acid transporter 0.76 IAI46_11135 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 86
Rahnella sp. WP5 0.60 EX31_RS08135 L-methionine/branched-chain amino acid transporter 0.69 EX31_RS13920 hotdog fold thioesterase low > 89
Pectobacterium carotovorum WPP14 0.56 HER17_RS17155 L-methionine/branched-chain amino acid transporter 0.73 HER17_RS08910 1,4-dihydroxy-2-naphthoyl-CoA hydrolase low > 75
Dickeya dadantii 3937 0.56 DDA3937_RS04505 L-methionine/branched-chain amino acid transporter 0.72 DDA3937_RS12790 hotdog fold thioesterase low > 74
Dickeya dianthicola 67-19 0.53 HGI48_RS04465 L-methionine/branched-chain amino acid transporter 0.72 HGI48_RS12855 hotdog fold thioesterase
Dickeya dianthicola ME23 0.52 DZA65_RS04385 L-methionine/branched-chain amino acid transporter 0.72 DZA65_RS13320 hotdog fold thioesterase low > 75
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_18370 L-methionine/branched-chain amino acid transporter 0.52 CSW01_17125 esterase low > 62
Shewanella loihica PV-4 0.25 Shew_3597 inner membrane protein YjeH (RefSeq) 0.41 Shew_3192 hypothetical protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.24 Sama_3458 inner membrane protein YjeH (RefSeq) 0.41 Sama_2944 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.23 Shewana3_3958 inner membrane protein YjeH (RefSeq) 0.40 Shewana3_0906 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.22 SO_4565 inner membrane protein YjeH (RefSeq) 0.40 SO1068 conserved hypothetical protein (NCBI ptt file) low > 76
Paraburkholderia sabiae LMG 24235 0.08 QEN71_RS14160 amino acid permease 0.23 QEN71_RS25080 PaaI family thioesterase low > 153

Not shown: 1 genomes with orthologs for GFF2011 only; 30 genomes with orthologs for GFF3555 only