Conservation of cofitness between PS417_08465 and PS417_16415 in Pseudomonas simiae WCS417

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_08465 elongation factor GreAB 1.0 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA 0.15 17
Pseudomonas fluorescens SBW25 0.94 PFLU_RS08415 elongation factor GreAB 0.98 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA low > 109
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS08415 elongation factor GreAB 0.98 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA low > 109
Pseudomonas lactucae CFBP13502 0.91 GEMAOFIL_01825 hypothetical protein 0.98 GEMAOFIL_03610 tRNA-cytidine(32) 2-sulfurtransferase low > 96
Pseudomonas orientalis W4I3 0.90 QF045_RS11185 transcription elongation factor GreAB 0.98 QF045_RS18170 tRNA 2-thiocytidine(32) synthetase TtcA low > 93
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_19065 transcription elongation factor GreAB 0.97 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA low > 101
Pseudomonas sp. DMC3 0.89 GFF4616 hypothetical protein 0.97 GFF4833 tRNA-cytidine(32) 2-sulfurtransferase low > 89
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_2231 Transcription elongation factor 0.99 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase low > 87
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_2464 Transcription elongation factor 0.95 Pf6N2E2_5711 tRNA(Cytosine32)-2-thiocytidine synthetase low > 103
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_03175 transcription elongation factor GreAB 0.94 AO356_19000 tRNA 2-thiocytidine biosynthesis protein TtcA low > 104
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_282 Transcription elongation factor 0.97 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase low > 87
Pseudomonas sp. RS175 0.82 PFR28_00967 hypothetical protein 0.94 PFR28_03236 tRNA-cytidine(32) 2-sulfurtransferase low > 88
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_3631 GreA/GreB family elongation factor 0.96 Psyr_3705 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_3631 GreA/GreB family elongation factor 0.96 Psyr_3705 conserved hypothetical protein 0.41 15
Pseudomonas sp. SVBP6 0.56 COO64_RS06070 transcription elongation factor GreAB 0.94 COO64_RS07395 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 93
Pseudomonas aeruginosa PUPa3 0.55 DQ20_RS45455 hypothetical protein 0.90 DQ20_RS46340 ttcA;go_process=tRNA tRNA 2-thiocytidine(32) synthetase TtcA low > 101
Pseudomonas aeruginosa MRSN321 0.55 DY961_RS07330 elongation factor GreAB 0.90 DY961_RS06455 ttcA;go_process=tRNA tRNA 2-thiocytidine(32) synthetase TtcA low > 100
Pseudomonas aeruginosa PA14 0.54 IKLFDK_04680 transcription elongation factor GreAB 0.90 IKLFDK_05600 tRNA 2-thiocytidine(32) synthetase TtcA low > 98
Variovorax sp. OAS795 0.51 ABID97_RS26815 GreA/GreB family elongation factor 0.65 ABID97_RS06505 tRNA 2-thiocytidine(32) synthetase TtcA — —
Pseudomonas putida KT2440 0.50 PP_1854 conserved protein of unknown function 0.93 PP_1641 tRNA 2-thiocytidine biosynthesis protein TtcA low > 96
Pseudomonas segetis P6 0.49 ACVTMO_RS03305 GreA/GreB family elongation factor 0.90 ACVTMO_RS08965 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 75
Pseudomonas sp. BP01 0.48 JOY50_RS17065 GreA/GreB family elongation factor 0.93 JOY50_RS23840 ttcA tRNA 2-thiocytidine(32) synthetase TtcA low > 84
Variovorax sp. SCN45 0.47 GFF7330 Transcription elongation factor 0.64 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA low > 127
Pseudomonas sp. S08-1 0.42 OH686_10700 Transcription elongation factor 0.89 OH686_05145 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA low > 80
Pseudomonas stutzeri RCH2 0.39 Psest_1382 Transcription elongation factor 0.89 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control low > 67

Not shown: 0 genomes with orthologs for PS417_08465 only; 70 genomes with orthologs for PS417_16415 only