Conservation of cofitness between GFF4300 and GFF2461 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4300 Proline-specific permease proY 1.0 GFF2461 Transglycosylase, Slt family 0.47 19
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.77 EX28DRAFT_0090 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein low > 76
Klebsiella michiganensis M5al 0.89 BWI76_RS06245 proline-specific permease ProY 0.76 BWI76_RS21275 lytic transglycosylase F low > 92
Enterobacter sp. TBS_079 0.88 MPMX20_00989 Proline-specific permease ProY 0.80 MPMX20_03427 Membrane-bound lytic murein transglycosylase F low > 85
Escherichia coli ECOR38 0.87 HEPCGN_07170 proY proline-specific permease ProY 0.83 HEPCGN_20610 mltF membrane-bound lytic murein transglycosylase MltF low > 87
Escherichia coli ECRC100 0.87 OKFHMN_08530 proY proline-specific permease ProY 0.83 OKFHMN_21465 mltF membrane-bound lytic murein transglycosylase MltF low > 80
Escherichia coli ECRC99 0.87 KEDOAH_19435 proY proline-specific permease ProY 0.83 KEDOAH_06755 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli Nissle 1917 0.87 ECOLIN_RS02425 proline-specific permease ProY 0.83 ECOLIN_RS14475 membrane-bound lytic murein transglycosylase MltF low > 55
Escherichia coli ECRC102 0.87 NIAGMN_06585 proY proline-specific permease ProY 0.83 NIAGMN_19235 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_03274 Proline-specific permease ProY 0.84 OHPLBJKB_01149 Membrane-bound lytic murein transglycosylase F low > 73
Escherichia coli ECOR27 0.87 NOLOHH_01460 proY proline-specific permease ProY 0.84 NOLOHH_13140 mltF membrane-bound lytic murein transglycosylase MltF low > 75
Escherichia coli BW25113 0.87 b0402 proY predicted cryptic proline transporter (NCBI) 0.84 b2558 mltF predicted periplasmic binding protein/transglycosylase (RefSeq) low > 76
Escherichia coli ECRC62 0.87 BNILDI_22875 proY proline-specific permease ProY 0.83 BNILDI_11940 mltF membrane-bound lytic murein transglycosylase MltF low > 75
Escherichia fergusonii Becca 0.87 EFB2_03655 Proline-specific permease ProY 0.83 EFB2_01338 Membrane-bound lytic murein transglycosylase F low > 86
Escherichia coli ECRC98 0.87 JDDGAC_12185 proY proline-specific permease ProY 0.83 JDDGAC_25130 mltF membrane-bound lytic murein transglycosylase MltF low > 86
Escherichia coli ECRC101 0.87 MCAODC_27755 proY proline-specific permease ProY 0.83 MCAODC_11995 mltF membrane-bound lytic murein transglycosylase MltF low > 87
Pantoea sp. MT58 0.80 IAI47_14830 proline-specific permease ProY 0.60 IAI47_04925 membrane-bound lytic murein transglycosylase MltF low > 76
Dickeya dianthicola ME23 0.80 DZA65_RS05835 proline-specific permease ProY 0.59 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS05510 proline-specific permease ProY 0.59 HGI48_RS15755 membrane-bound lytic murein transglycosylase MltF low > 71
Rahnella sp. WP5 0.79 EX31_RS22070 proline-specific permease ProY 0.55 EX31_RS21890 membrane-bound lytic murein transglycosylase MltF low > 89
Serratia liquefaciens MT49 0.77 IAI46_04800 proline-specific permease ProY 0.55 IAI46_19480 membrane-bound lytic murein transglycosylase MltF low > 86
Pectobacterium carotovorum WPP14 0.77 HER17_RS16015 proline-specific permease ProY 0.56 HER17_RS05905 membrane-bound lytic murein transglycosylase MltF low > 75
Dickeya dadantii 3937 0.74 DDA3937_RS05450 proline-specific permease ProY 0.59 DDA3937_RS15660 membrane-bound lytic murein transglycosylase MltF 0.63 3
Erwinia tracheiphila SCR3 0.69 LU632_RS18885 proY proline-specific permease ProY 0.59 LU632_RS17980 mltF membrane-bound lytic murein transglycosylase MltF low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_4834 histidine:proton symporter, AAT family 0.28 Psyr_1268 extracellular solute-binding protein, family 3:SLT low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_4834 histidine:proton symporter, AAT family 0.28 Psyr_1268 extracellular solute-binding protein, family 3:SLT low > 86
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_12275 histidine permease (from data) 0.30 AO353_04490 murein transglycosylase low > 101
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_1580 Histidine transport protein (permease) 0.30 Pf1N1B4_888 Transglycosylase, Slt family low > 87
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_318 Histidine transport protein (permease) 0.30 PfGW456L13_4836 Transglycosylase, Slt family low > 87
Pseudomonas sp. RS175 0.53 PFR28_03490 Proline-specific permease ProY 0.30 PFR28_03519 Membrane-bound lytic murein transglycosylase F 0.25 62
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_17670 L-alanine and D-alanine permease (from data) 0.31 AO356_17515 murein transglycosylase low > 104

Not shown: 14 genomes with orthologs for GFF4300 only; 13 genomes with orthologs for GFF2461 only