Conservation of cofitness between PS417_17725 and PS417_12310 in Pseudomonas simiae WCS417

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_17725 ribose ABC transporter permease 1.0 PS417_12310 methionine synthase 0.20 12
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS19510 sugar ABC transporter permease 0.98 PFLU_RS13000 methionine synthase low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS19510 sugar ABC transporter permease 0.98 PFLU_RS13000 methionine synthase low > 109
Agrobacterium fabrum C58 0.56 Atu4322 ribose ABC transporter permease 0.59 Atu2155 methionine synthase low > 89
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS05325 ribose ABC transporter permease 0.60 HSERO_RS21740 methionine synthase low > 78
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS15230 ABC transporter permease 0.60 ABZR88_RS20930 methionine synthase — —
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_14655 ribose ABC transporter permease 0.64 CSW01_02060 methionine synthase low > 62
Pectobacterium carotovorum WPP14 0.40 HER17_RS21540 ribose ABC transporter permease 0.66 HER17_RS02310 methionine synthase low > 75
Pantoea sp. MT58 0.40 IAI47_00360 ribose ABC transporter permease 0.66 IAI47_17990 methionine synthase low > 76
Rahnella sp. WP5 0.39 EX31_RS06180 ribose ABC transporter permease 0.66 EX31_RS11760 methionine synthase 0.34 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF1707 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) 0.65 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 78
Dickeya dianthicola ME23 0.39 DZA65_RS22305 ribose ABC transporter permease 0.65 DZA65_RS20250 methionine synthase low > 75
Dickeya dianthicola 67-19 0.39 HGI48_RS21325 ribose ABC transporter permease 0.64 HGI48_RS19130 methionine synthase low > 71
Dickeya dadantii 3937 0.39 DDA3937_RS00040 ribose ABC transporter permease 0.65 DDA3937_RS19040 methionine synthase low > 74
Serratia liquefaciens MT49 0.39 IAI46_25065 ribose ABC transporter permease 0.65 IAI46_23155 methionine synthase low > 86
Enterobacter asburiae PDN3 0.38 EX28DRAFT_4026 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 0.65 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) 0.55 37
Enterobacter sp. TBS_079 0.38 MPMX20_04617 Ribose import permease protein RbsC 0.65 MPMX20_00235 Methionine synthase low > 85
Klebsiella michiganensis M5al 0.38 BWI76_RS00280 ribose ABC transporter permease 0.65 BWI76_RS01685 methionine synthase low > 92
Escherichia coli ECOR38 0.38 HEPCGN_13450 rbsC ribose ABC transporter permease 0.65 HEPCGN_11885 metH methionine synthase low > 87
Escherichia coli BW25113 0.38 b3750 rbsC ribose ABC transporter permease protein (NCBI) 0.65 b4019 metH B12-dependent methionine synthase (NCBI) low > 76
Escherichia coli ECRC99 0.38 KEDOAH_13410 rbsC ribose ABC transporter permease 0.65 KEDOAH_14920 metH methionine synthase — —
Escherichia fergusonii Becca 0.38 EFB2_04883 Ribose import permease protein RbsC 0.65 EFB2_04592 Methionine synthase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_04303 Ribose import permease protein RbsC 0.65 OHPLBJKB_04030 Methionine synthase low > 73
Escherichia coli ECRC62 0.38 BNILDI_04650 rbsC ribose ABC transporter permease 0.65 BNILDI_06140 metH methionine synthase low > 75
Escherichia coli ECOR27 0.38 NOLOHH_06875 rbsC ribose ABC transporter permease 0.65 NOLOHH_05380 metH methionine synthase low > 75
Escherichia coli ECRC100 0.38 OKFHMN_14740 rbsC ribose ABC transporter permease 0.65 OKFHMN_13240 metH methionine synthase low > 80
Escherichia coli Nissle 1917 0.38 ECOLIN_RS21560 ribose ABC transporter permease 0.65 ECOLIN_RS23160 methionine synthase low > 55
Escherichia coli ECRC98 0.38 JDDGAC_18360 rbsC ribose ABC transporter permease 0.65 JDDGAC_16865 metH methionine synthase low > 86
Escherichia coli BL21 0.38 ECD_03636 D-ribose ABC transporter permease 0.65 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent low > 61
Escherichia coli ECRC102 0.38 NIAGMN_12495 rbsC ribose ABC transporter permease 0.65 NIAGMN_10990 metH methionine synthase — —
Escherichia coli ECRC101 0.38 MCAODC_05245 rbsC ribose ABC transporter permease 0.65 MCAODC_03740 metH methionine synthase 0.53 79
Azospirillum sp. SherDot2 0.35 MPMX19_03311 Ribose import permease protein RbsC 0.22 MPMX19_00637 Methionine synthase — —
Sinorhizobium meliloti 1021 0.35 SM_b21375 sugar uptake ABC transporter permease 0.59 SMc03112 B12-dependent methionine synthase low > 103
Rhizobium sp. OAE497 0.32 ABIE40_RS24655 ABC transporter permease 0.60 ABIE40_RS12135 methionine synthase low > 107

Not shown: 15 genomes with orthologs for PS417_17725 only; 29 genomes with orthologs for PS417_12310 only