Conservation of cofitness between GFF4863 and GFF2324 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4863 'LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM' transl_table=11 1.0 GFF2324 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) 0.57 3
Escherichia coli Nissle 1917 0.96 ECOLIN_RS15640 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.95 ECOLIN_RS22730 bifunctional aspartate kinase/homoserine dehydrogenase II low > 55
Escherichia coli ECRC98 0.96 JDDGAC_23795 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.95 JDDGAC_17295 metL bifunctional aspartate kinase/homoserine dehydrogenase II low > 86
Escherichia coli ECRC102 0.96 NIAGMN_17900 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.95 NIAGMN_11425 metL bifunctional aspartate kinase/homoserine dehydrogenase II — —
Escherichia coli ECRC62 0.96 BNILDI_10515 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.95 BNILDI_05720 metL bifunctional aspartate kinase/homoserine dehydrogenase II low > 75
Escherichia coli ECRC99 0.96 KEDOAH_08000 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.95 KEDOAH_14490 metL bifunctional aspartate kinase/homoserine dehydrogenase II — —
Escherichia coli ECRC101 0.96 MCAODC_10655 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.95 MCAODC_04170 metL bifunctional aspartate kinase/homoserine dehydrogenase II low > 87
Escherichia coli ECOR27 0.96 NOLOHH_12010 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.95 NOLOHH_05815 metL bifunctional aspartate kinase/homoserine dehydrogenase II low > 75
Escherichia coli ECOR38 0.96 HEPCGN_19385 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.95 HEPCGN_12340 metL bifunctional aspartate kinase/homoserine dehydrogenase II low > 87
Escherichia coli BL21 0.96 ECD_02657 23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent 0.95 ECD_03826 Bifunctional aspartokinase/homoserine dehydrogenase 2 low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.96 OHPLBJKB_00925 Ribosomal RNA large subunit methyltransferase M 0.95 OHPLBJKB_04110 Bifunctional aspartokinase/homoserine dehydrogenase 2 low > 73
Escherichia coli ECRC100 0.96 OKFHMN_20130 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.95 OKFHMN_13670 metL bifunctional aspartate kinase/homoserine dehydrogenase II 0.65 29
Escherichia coli BW25113 0.96 b2806 ygdE predicted methyltransferase (NCBI) 0.95 b3940 metL bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) low > 76
Escherichia fergusonii Becca 0.96 EFB2_01111 Ribosomal RNA large subunit methyltransferase M 0.95 EFB2_04678 Bifunctional aspartokinase/homoserine dehydrogenase 2 low > 86
Enterobacter sp. TBS_079 0.93 MPMX20_03669 Ribosomal RNA large subunit methyltransferase M 0.93 MPMX20_04530 Bifunctional aspartokinase/homoserine dehydrogenase 2 low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS22945 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.94 BWI76_RS00790 bifunctional aspartokinase II/homoserine dehydrogenase II low > 92
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2881 Predicted SAM-dependent methyltransferase 0.93 EX28DRAFT_4412 aspartate kinase (EC 2.7.2.4) low > 76
Pantoea sp. MT58 0.80 IAI47_04035 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.85 IAI47_00885 bifunctional aspartate kinase/homoserine dehydrogenase II low > 76
Pectobacterium carotovorum WPP14 0.79 HER17_RS16405 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.82 HER17_RS00915 bifunctional aspartate kinase/homoserine dehydrogenase II low > 75
Serratia liquefaciens MT49 0.79 IAI46_20330 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.85 IAI46_24535 bifunctional aspartate kinase/homoserine dehydrogenase II low > 86
Erwinia tracheiphila SCR3 0.77 LU632_RS06265 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.81 LU632_RS19635 bifunctional aspartate kinase/homoserine dehydrogenase II low > 74
Rahnella sp. WP5 0.77 EX31_RS13100 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.83 EX31_RS14210 bifunctional aspartate kinase/homoserine dehydrogenase II low > 89
Dickeya dianthicola ME23 0.77 DZA65_RS05400 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.82 DZA65_RS21465 bifunctional aspartate kinase/homoserine dehydrogenase II low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS05060 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.82 HGI48_RS20420 bifunctional aspartate kinase/homoserine dehydrogenase II low > 71
Dickeya dadantii 3937 0.77 DDA3937_RS05060 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM 0.82 DDA3937_RS00955 bifunctional aspartate kinase/homoserine dehydrogenase II low > 74
Shewanella sp. ANA-3 0.57 Shewana3_2891 putative RNA 2'-O-ribose methyltransferase (RefSeq) 0.34 Shewana3_3613 metL bifunctional aspartate kinase II/homoserine dehydrogenase II (RefSeq) low > 73
Shewanella amazonensis SB2B 0.56 Sama_2426 putative RNA 2'-O-ribose methyltransferase (RefSeq) 0.34 Sama_3170 metL bifunctional aspartate kinase II/homoserine dehydrogenase II (RefSeq) low > 62
Shewanella loihica PV-4 0.56 Shew_2761 putative RNA 2'-O-ribose methyltransferase (RefSeq) 0.34 Shew_0521 metL bifunctional aspartate kinase II/homoserine dehydrogenase II (RefSeq) low > 60
Shewanella oneidensis MR-1 0.56 SO1536 conserved hypothetical protein (NCBI ptt file) 0.35 SO4055 metL aspartokinase II/homoserine dehydrogenase, methionine-sensitive (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2158 Predicted SAM-dependent methyltransferase 0.24 B158DRAFT_2460 aspartate kinase (EC 2.7.2.4) low > 40

Not shown: 18 genomes with orthologs for GFF4863 only; 1 genomes with orthologs for GFF2324 only